Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 AC020910.5-201ENST00000623668 1865 ntBASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 AC079178.1-201ENST00000420915 656 ntBASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 AL035414.1-201ENST00000451327 857 ntBASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 AC244157.2-201ENST00000616239 1006 ntBASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 RPS2P32-201ENST00000439199 892 ntBASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 MIR4259-201ENST00000584466 101 ntBASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 INE2-201ENST00000630399 1874 ntBASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PARPBPQ9NWS1 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms