Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CICP23-201ENST00000605013 2741 ntBASIC13.22□□□□□ -0.29
CHD8Q9HCK8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 RPL29P2-201ENST00000488409 460 ntBASIC13.22□□□□□ -0.29
CHD8Q9HCK8 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 AC010202.1-201ENST00000551181 405 ntBASIC13.22□□□□□ -0.29
CHD8Q9HCK8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 MIR4265-201ENST00000582152 99 ntBASIC13.22□□□□□ -0.29
CHD8Q9HCK8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 AL591499.1-201ENST00000307155 1153 ntBASIC13.21□□□□□ -0.29
CHD8Q9HCK8 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 AC006987.1-201ENST00000413610 527 ntBASIC13.21□□□□□ -0.29
CHD8Q9HCK8 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 HNRNPA1P73-201ENST00000446472 928 ntBASIC13.21□□□□□ -0.29
CHD8Q9HCK8 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 NOC2LP2-201ENST00000407594 1944 ntBASIC13.21□□□□□ -0.29
CHD8Q9HCK8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHD8Q9HCK8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.21□□□□□ -0.3
CHD8Q9HCK8 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.21□□□□□ -0.3
CHD8Q9HCK8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.21□□□□□ -0.3
CHD8Q9HCK8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHD8Q9HCK8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHD8Q9HCK8 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.21□□□□□ -0.3
CHD8Q9HCK8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC13.21□□□□□ -0.3
CHD8Q9HCK8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.21□□□□□ -0.3
CHD8Q9HCK8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CHD8Q9HCK8 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHD8Q9HCK8 RBP4-203ENST00000371469 814 ntTSL 5 BASIC13.21□□□□□ -0.3
CHD8Q9HCK8 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC13.21□□□□□ -0.3
CHD8Q9HCK8 BAK1P2-201ENST00000532665 631 ntBASIC13.21□□□□□ -0.3
CHD8Q9HCK8 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC13.21□□□□□ -0.3
CHD8Q9HCK8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.21□□□□□ -0.3
CHD8Q9HCK8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.21□□□□□ -0.3
CHD8Q9HCK8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 KRT8P38-201ENST00000441370 1430 ntBASIC13.2□□□□□ -0.3
CHD8Q9HCK8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 AC063977.2-201ENST00000601996 421 ntBASIC13.2□□□□□ -0.3
CHD8Q9HCK8 AC022296.3-201ENST00000608823 403 ntBASIC13.2□□□□□ -0.3
CHD8Q9HCK8 HPX-213ENST00000615166 826 ntTSL 5 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 AC092850.2-201ENST00000623821 2697 ntBASIC13.2□□□□□ -0.3
CHD8Q9HCK8 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CHD8Q9HCK8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms