Protein–RNA interactions for Protein: Q9BZR9

TRIM8, Probable E3 ubiquitin-protein ligase TRIM8, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8Q9BZR9 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 TMEM14DP-201ENST00000422205 345 ntBASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 AL589987.1-201ENST00000453380 819 ntBASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 SPDYE18-201ENST00000510091 1050 ntBASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 SDHAP3-202ENST00000515467 728 ntBASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 AC055876.2-201ENST00000531834 546 ntBASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 AC133552.6-201ENST00000613406 534 ntBASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM8Q9BZR9 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRIM8Q9BZR9 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 GAPDHP40-201ENST00000505218 1006 ntBASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 SNX29P1-201ENST00000548357 1007 ntBASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TRIM8Q9BZR9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms