Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 AC092337.1-201ENST00000568699 1129 ntBASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 MIR8072-201ENST00000614241 80 ntBASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 TCAM1P-207ENST00000485295 1537 ntBASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRIM55Q9BYV6 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 AC074338.1-201ENST00000416825 156 ntBASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 AC119751.2-201ENST00000504529 210 ntBASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 SAMD11P1-201ENST00000571429 661 ntBASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 AC074044.1-201ENST00000609673 707 ntBASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 AL360270.3-201ENST00000609118 1348 ntBASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM55Q9BYV6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM55Q9BYV6 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM55Q9BYV6 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM55Q9BYV6 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.89□□□□□ -0.03
TRIM55Q9BYV6 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM55Q9BYV6 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRIM55Q9BYV6 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM55Q9BYV6 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM55Q9BYV6 AC005562.1-201ENST00000583030 3219 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms