Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHANK3Q9BYB0 AC073869.4-201ENST00000620841 800 ntBASIC18.24■□□□□ 0.51
SHANK3Q9BYB0 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC18.24■□□□□ 0.51
SHANK3Q9BYB0 AC139713.2-207ENST00000641556 1292 ntBASIC18.24■□□□□ 0.51
SHANK3Q9BYB0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHANK3Q9BYB0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHANK3Q9BYB0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.24■□□□□ 0.51
SHANK3Q9BYB0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHANK3Q9BYB0 DDC-204ENST00000426377 1700 ntTSL 3 BASIC18.24■□□□□ 0.51
SHANK3Q9BYB0 FES-203ENST00000394302 2133 ntTSL 5 BASIC18.24■□□□□ 0.51
SHANK3Q9BYB0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SHANK3Q9BYB0 SIRPB3P-201ENST00000340424 1216 ntBASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 EEF1DP5-201ENST00000431410 772 ntBASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 AC113347.2-201ENST00000512350 279 ntBASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 HNRNPA1P5-201ENST00000558213 966 ntBASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 AC018846.1-201ENST00000568231 183 ntBASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 AC020763.4-201ENST00000623414 4170 ntBASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 AP001267.2-201ENST00000532619 2086 ntBASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 HMGA1P1-201ENST00000415560 1062 ntBASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 KRT18P15-201ENST00000458108 1291 ntBASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 CASP3-205ENST00000517513 964 ntTSL 5 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 HCG18-241ENST00000602290 821 ntTSL 2 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 KF455155.1-201ENST00000604493 303 ntBASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHANK3Q9BYB0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 RPSAP6-201ENST00000417882 882 ntBASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 BCRP4-201ENST00000506079 804 ntBASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 COQ10BP2-201ENST00000513804 724 ntBASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHANK3Q9BYB0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SHANK3Q9BYB0 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC18.21■□□□□ 0.51
SHANK3Q9BYB0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHANK3Q9BYB0 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHANK3Q9BYB0 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHANK3Q9BYB0 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC18.21■□□□□ 0.51
SHANK3Q9BYB0 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC18.21■□□□□ 0.51
SHANK3Q9BYB0 PGK1P2-201ENST00000431702 1214 ntBASIC18.21■□□□□ 0.51
SHANK3Q9BYB0 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SHANK3Q9BYB0 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC18.21■□□□□ 0.51
SHANK3Q9BYB0 FBXO36P1-201ENST00000579006 471 ntBASIC18.21■□□□□ 0.51
SHANK3Q9BYB0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHANK3Q9BYB0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms