Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 TMEM261P1-201ENST00000604899 340 ntBASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 AC008494.3-201ENST00000606615 944 ntBASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 PRSS30P-206ENST00000641773 873 ntBASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CHRDL1Q9BU40 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 AC023090.2-201ENST00000625182 2110 ntBASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 MST1P2-201ENST00000457982 2291 ntBASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 RNU1-114P-201ENST00000365297 166 ntBASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 AL139094.1-201ENST00000405549 1188 ntBASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 CTBP2P3-201ENST00000585629 1255 ntBASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 AC133539.2-201ENST00000604757 467 ntBASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 HNRNPA1P48-201ENST00000562726 1377 ntBASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHRDL1Q9BU40 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms