Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TUBA1CQ9BQE3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 AC234783.1-201ENST00000441761 496 ntBASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 CLUHP6-201ENST00000580789 941 ntBASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 AC233724.13-201ENST00000598383 410 ntBASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 AC005252.2-201ENST00000624630 1141 ntBASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1CQ9BQE3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 AL139385.1-201ENST00000611744 3272 ntBASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 CROCCP4-201ENST00000457096 498 ntBASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 PTP4A1P2-201ENST00000546033 454 ntBASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 AC093813.1-201ENST00000605066 256 ntBASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 AC018665.1-201ENST00000622927 1362 ntBASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms