Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.98□□□□□ -0.17
CGREF1Q99674 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.98□□□□□ -0.17
CGREF1Q99674 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.98□□□□□ -0.17
CGREF1Q99674 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CGREF1Q99674 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CGREF1Q99674 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 AC139712.1-201ENST00000378256 1875 ntBASIC13.98□□□□□ -0.17
CGREF1Q99674 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CGREF1Q99674 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 AGAP10P-201ENST00000454844 2418 ntBASIC13.98□□□□□ -0.17
CGREF1Q99674 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CGREF1Q99674 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.98□□□□□ -0.17
CGREF1Q99674 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.98□□□□□ -0.17
CGREF1Q99674 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.98□□□□□ -0.17
CGREF1Q99674 SORD2P-201ENST00000558556 1069 ntBASIC13.98□□□□□ -0.17
CGREF1Q99674 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.98□□□□□ -0.17
CGREF1Q99674 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.98□□□□□ -0.17
CGREF1Q99674 AP001002.3-201ENST00000623482 206 ntBASIC13.98□□□□□ -0.17
CGREF1Q99674 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.98□□□□□ -0.17
CGREF1Q99674 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CGREF1Q99674 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.98□□□□□ -0.17
CGREF1Q99674 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 KHSRPP1-201ENST00000427983 1768 ntBASIC13.98□□□□□ -0.17
CGREF1Q99674 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CGREF1Q99674 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CGREF1Q99674 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 AC015909.5-201ENST00000624336 2266 ntBASIC13.98□□□□□ -0.17
CGREF1Q99674 AL157996.1-201ENST00000624684 2299 ntBASIC13.98□□□□□ -0.17
CGREF1Q99674 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CGREF1Q99674 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.98□□□□□ -0.17
CGREF1Q99674 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.98□□□□□ -0.17
CGREF1Q99674 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CGREF1Q99674 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CGREF1Q99674 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.98□□□□□ -0.17
CGREF1Q99674 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CGREF1Q99674 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
CGREF1Q99674 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.97□□□□□ -0.17
CGREF1Q99674 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CGREF1Q99674 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.97□□□□□ -0.17
CGREF1Q99674 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CGREF1Q99674 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.97□□□□□ -0.17
CGREF1Q99674 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 SPDYE19P-201ENST00000338590 713 ntBASIC13.97□□□□□ -0.17
CGREF1Q99674 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 RN7SKP230-201ENST00000365642 335 ntBASIC13.97□□□□□ -0.17
CGREF1Q99674 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.97□□□□□ -0.17
CGREF1Q99674 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.97□□□□□ -0.17
CGREF1Q99674 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.97□□□□□ -0.17
CGREF1Q99674 AL442647.2-201ENST00000429864 857 ntBASIC13.97□□□□□ -0.17
CGREF1Q99674 FO681548.1-201ENST00000455617 1132 ntBASIC13.97□□□□□ -0.17
CGREF1Q99674 AC104596.2-201ENST00000512793 793 ntBASIC13.97□□□□□ -0.17
CGREF1Q99674 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.97□□□□□ -0.17
CGREF1Q99674 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.97□□□□□ -0.17
CGREF1Q99674 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.97□□□□□ -0.17
CGREF1Q99674 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.97□□□□□ -0.17
CGREF1Q99674 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.97□□□□□ -0.17
CGREF1Q99674 MIR8072-201ENST00000614241 80 ntBASIC13.97□□□□□ -0.17
CGREF1Q99674 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CGREF1Q99674 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms