Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 COX20P1-201ENST00000366529 357 ntBASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 RN7SL582P-201ENST00000491078 279 ntBASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 AC012158.2-201ENST00000536546 354 ntBASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 MIR6074-201ENST00000612054 107 ntBASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 AC022532.1-201ENST00000624563 1728 ntBASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 AL596257.1-201ENST00000641463 2694 ntBASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 HYMAI-201ENST00000635591 3347 ntBASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 CHCHD2P2-201ENST00000503744 321 ntBASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 THY1-209ENST00000580275 578 ntTSL 3 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 AC010976.2-201ENST00000609697 852 ntBASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 AC006483.2-201ENST00000609813 515 ntBASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 ODCP-201ENST00000459650 1639 ntBASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 AC006486.2-201ENST00000624246 2199 ntBASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRAMP1Q96RY5 KRT8P18-201ENST00000413425 1445 ntBASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 NME4-203ENST00000397722 1232 ntTSL 2 BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 RN7SL375P-201ENST00000492442 298 ntBASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 MIR4265-201ENST00000582152 99 ntBASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 AP005264.6-204ENST00000588436 719 ntBASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 AL009176.1-201ENST00000607876 650 ntBASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CRAMP1Q96RY5 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms