Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 HLA-A-201ENST00000376802 1334 ntBASIC11.17□□□□□ -0.62
AP1S3Q96PC3 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 AC018529.2-202ENST00000611482 3087 ntBASIC11.17□□□□□ -0.62
AP1S3Q96PC3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 SLC25A39P2-201ENST00000537614 270 ntBASIC11.17□□□□□ -0.62
AP1S3Q96PC3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 AC092865.6-201ENST00000642101 219 ntBASIC11.17□□□□□ -0.62
AP1S3Q96PC3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 STX16-202ENST00000355957 4897 ntTSL 2 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 ANXA11-202ENST00000372231 6720 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
AP1S3Q96PC3 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 CEP41-201ENST00000223208 6513 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.16□□□□□ -0.62
AP1S3Q96PC3 AL133267.1-201ENST00000398220 340 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms