Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.12■□□□□ 0.01
HDAC11Q96DB2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 AC215219.1-201ENST00000400706 1817 ntBASIC15.11■□□□□ 0.01
HDAC11Q96DB2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 AC112492.5-201ENST00000421897 457 ntBASIC15.11■□□□□ 0.01
HDAC11Q96DB2 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 CNN2P10-201ENST00000443067 918 ntBASIC15.11■□□□□ 0.01
HDAC11Q96DB2 AL355994.2-201ENST00000447882 704 ntBASIC15.11■□□□□ 0.01
HDAC11Q96DB2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 AC079316.1-201ENST00000548397 411 ntBASIC15.11■□□□□ 0.01
HDAC11Q96DB2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 AL512343.1-201ENST00000605837 169 ntBASIC15.11■□□□□ 0.01
HDAC11Q96DB2 AL358472.3-201ENST00000608147 415 ntBASIC15.11■□□□□ 0.01
HDAC11Q96DB2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDAC11Q96DB2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 DMBT1P1-203ENST00000636837 4628 ntBASIC15.1■□□□□ 0.01
HDAC11Q96DB2 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 CHMP1AP1-201ENST00000445563 662 ntBASIC15.1■□□□□ 0.01
HDAC11Q96DB2 KLF2P4-201ENST00000451959 1225 ntBASIC15.1■□□□□ 0.01
HDAC11Q96DB2 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms