Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 MIR663B-201ENST00000408361 115 ntBASIC12.85□□□□□ -0.35
TMEM54Q969K7 BTBD6P1-201ENST00000412176 1267 ntBASIC12.85□□□□□ -0.35
TMEM54Q969K7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 TUBB8P8-201ENST00000458717 1058 ntBASIC12.85□□□□□ -0.35
TMEM54Q969K7 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.85□□□□□ -0.35
TMEM54Q969K7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 AL160314.3-201ENST00000556041 767 ntBASIC12.85□□□□□ -0.35
TMEM54Q969K7 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 AC144522.1-201ENST00000625111 1658 ntBASIC12.85□□□□□ -0.35
TMEM54Q969K7 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 CICP16-201ENST00000502609 2813 ntBASIC12.84□□□□□ -0.35
TMEM54Q969K7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 AC006122.1-201ENST00000493323 440 ntBASIC12.84□□□□□ -0.35
TMEM54Q969K7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 AC005730.2-201ENST00000564549 1184 ntBASIC12.84□□□□□ -0.35
TMEM54Q969K7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 AL096828.3-201ENST00000615354 462 ntBASIC12.84□□□□□ -0.35
TMEM54Q969K7 AL023803.2-201ENST00000620080 638 ntBASIC12.84□□□□□ -0.35
TMEM54Q969K7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 AL928921.2-201ENST00000641325 2442 ntBASIC12.84□□□□□ -0.35
TMEM54Q969K7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 TUBB1P2-201ENST00000422712 1306 ntBASIC12.84□□□□□ -0.35
TMEM54Q969K7 TUBB1P1-201ENST00000503144 1300 ntBASIC12.84□□□□□ -0.35
TMEM54Q969K7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TMEM54Q969K7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.84□□□□□ -0.35
TMEM54Q969K7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms