Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
RTN4IP1Q8WWV3 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 SOCS2P1-201ENST00000417727 557 ntBASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 AC098850.1-201ENST00000419919 790 ntBASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 AC140912.1-201ENST00000577171 1054 ntBASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RTN4IP1Q8WWV3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 AL158070.2-201ENST00000623713 1621 ntBASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 NUS1P3-201ENST00000423502 862 ntBASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 HLA-K-203ENST00000430151 1046 ntBASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 HMGN1P19-201ENST00000436976 333 ntBASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 AC190387.1-201ENST00000551683 408 ntBASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 AC124283.3-201ENST00000570869 594 ntBASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.4□□□□□ -0.42
RTN4IP1Q8WWV3 AC133539.2-201ENST00000604757 467 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms