Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 AC244093.1-201ENST00000610837 814 ntBASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSMEM1Q8WWF3 AC027601.5-201ENST00000624065 2482 ntBASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 AC079781.5-202ENST00000641784 3743 ntBASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 DMBT1P1-203ENST00000636837 4628 ntBASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 AC018529.2-202ENST00000611482 3087 ntBASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 AC015818.8-201ENST00000587907 1519 ntBASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 MIR326-201ENST00000362220 95 ntBASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 AC006033.1-201ENST00000440505 426 ntBASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 MTX1P1-201ENST00000440904 838 ntBASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 AC245100.3-201ENST00000441281 285 ntBASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 HOMER2P2-201ENST00000451621 847 ntBASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 AC099548.2-209ENST00000480264 625 ntBASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 MIR4741-201ENST00000579822 90 ntBASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSMEM1Q8WWF3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSMEM1Q8WWF3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms