Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 CLK3P2-201ENST00000427566 1453 ntBASIC12.78□□□□□ -0.36
CCDC107Q8WV48 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 AL157414.3-201ENST00000624276 1954 ntBASIC12.78□□□□□ -0.36
CCDC107Q8WV48 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC107Q8WV48 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CCDC107Q8WV48 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC107Q8WV48 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC107Q8WV48 AGGF1P1-201ENST00000509500 2073 ntBASIC12.77□□□□□ -0.36
CCDC107Q8WV48 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC107Q8WV48 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC107Q8WV48 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.77□□□□□ -0.36
CCDC107Q8WV48 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC107Q8WV48 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCDC107Q8WV48 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CCDC107Q8WV48 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CCDC107Q8WV48 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 NUTM2HP-201ENST00000442076 2498 ntBASIC12.77□□□□□ -0.37
CCDC107Q8WV48 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 AC104457.1-201ENST00000401024 814 ntBASIC12.77□□□□□ -0.37
CCDC107Q8WV48 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 AC055876.3-201ENST00000431496 288 ntBASIC12.77□□□□□ -0.37
CCDC107Q8WV48 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 AC009477.1-201ENST00000452936 217 ntBASIC12.77□□□□□ -0.37
CCDC107Q8WV48 AC004066.1-201ENST00000502488 802 ntBASIC12.77□□□□□ -0.37
CCDC107Q8WV48 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 ZNF890P-202ENST00000530367 1156 ntBASIC12.77□□□□□ -0.37
CCDC107Q8WV48 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 AC092337.1-201ENST00000568699 1129 ntBASIC12.77□□□□□ -0.37
CCDC107Q8WV48 AC000095.1-201ENST00000603208 874 ntBASIC12.77□□□□□ -0.37
CCDC107Q8WV48 AC008738.7-201ENST00000609744 511 ntBASIC12.77□□□□□ -0.37
CCDC107Q8WV48 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 AC138649.4-201ENST00000612222 287 ntBASIC12.77□□□□□ -0.37
CCDC107Q8WV48 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC107Q8WV48 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 AC073957.3-201ENST00000609998 6758 ntBASIC12.76□□□□□ -0.37
CCDC107Q8WV48 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 SRD5A3P1-201ENST00000603021 949 ntBASIC12.76□□□□□ -0.37
CCDC107Q8WV48 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.76□□□□□ -0.37
CCDC107Q8WV48 AC004840.1-201ENST00000636359 365 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms