Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 RBP4-203ENST00000371469 814 ntTSL 5 BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 BOLA3P2-201ENST00000586496 323 ntBASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 AC136621.1-201ENST00000624017 2304 ntBASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
COL22A1Q8NFW1 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
COL22A1Q8NFW1 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC18.71■□□□□ 0.58
COL22A1Q8NFW1 OR7E12P-201ENST00000344740 973 ntBASIC18.71■□□□□ 0.58
COL22A1Q8NFW1 HMGA1P2-201ENST00000430198 324 ntBASIC18.71■□□□□ 0.58
COL22A1Q8NFW1 HLA-W-207ENST00000439514 771 ntBASIC18.71■□□□□ 0.58
COL22A1Q8NFW1 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
COL22A1Q8NFW1 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC18.71■□□□□ 0.58
COL22A1Q8NFW1 RNASEH2CP1-201ENST00000454281 502 ntBASIC18.71■□□□□ 0.58
COL22A1Q8NFW1 TMA16-204ENST00000508268 608 ntTSL 2 BASIC18.71■□□□□ 0.58
COL22A1Q8NFW1 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
COL22A1Q8NFW1 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC18.71■□□□□ 0.58
COL22A1Q8NFW1 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC18.71■□□□□ 0.58
COL22A1Q8NFW1 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
COL22A1Q8NFW1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 AL354702.1-201ENST00000442006 1960 ntBASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 HSD3BP1-201ENST00000286193 1111 ntBASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 POP5-201ENST00000341039 913 ntTSL 2 BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 AC022001.3-201ENST00000606330 596 ntBASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 AC068760.1-201ENST00000493579 1953 ntBASIC18.7■□□□□ 0.58
COL22A1Q8NFW1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 THAP4-203ENST00000402545 833 ntTSL 5 BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 AC005722.1-201ENST00000431878 964 ntBASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 MST1L-204ENST00000545160 559 ntTSL 4 BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 AC120498.5-201ENST00000561757 299 ntBASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 CDC37P2-201ENST00000562287 1029 ntBASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 AC021321.1-201ENST00000607397 1113 ntBASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 AC138627.1-201ENST00000641127 1257 ntBASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms