Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRFBP1Q8NEF9 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 AC007191.1-201ENST00000623179 2995 ntBASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 AP001267.2-201ENST00000532619 2086 ntBASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SRFBP1Q8NEF9 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 PTENP1-202ENST00000532280 3996 ntBASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 FAM21FP-201ENST00000426241 1131 ntBASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 CSF2RBP1-201ENST00000447905 391 ntBASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 KRT223P-202ENST00000449164 1292 ntBASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 AC022210.1-201ENST00000449856 793 ntBASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 HILS1-202ENST00000545329 423 ntBASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 AC244157.2-201ENST00000616239 1006 ntBASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 COX11-210ENST00000639671 696 ntBASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRFBP1Q8NEF9 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 ST20-AS1-201ENST00000560255 4223 ntBASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 HLA-V-201ENST00000429037 534 ntBASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 FAM58BP-201ENST00000439056 645 ntBASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 IGHV3-71-201ENST00000523324 359 ntBASIC14.01□□□□□ -0.17
SRFBP1Q8NEF9 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms