Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC22.19■■□□□ 1.14
CFAP43Q8NDM7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.19■■□□□ 1.14
CFAP43Q8NDM7 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 RPS18P9-201ENST00000482817 460 ntBASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 AC005740.1-201ENST00000515639 522 ntBASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 PMEL-214ENST00000550447 901 ntTSL 3 BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 AL160191.2-201ENST00000603975 601 ntBASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC22.18■■□□□ 1.14
CFAP43Q8NDM7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 PFN2-212ENST00000490975 858 ntTSL 4 BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 AC008026.2-201ENST00000495438 348 ntBASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 AC233280.19-201ENST00000633223 136 ntBASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 SHMT1P1-201ENST00000419974 1312 ntBASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 ADK-205ENST00000539909 1866 ntTSL 2 BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 AC020910.6-201ENST00000623084 1459 ntBASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 SNORA57-201ENST00000383870 149 ntBASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 BAX-205ENST00000391871 687 ntTSL 5 BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 RN7SL147P-201ENST00000487345 298 ntBASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 KRT18P37-201ENST00000520711 1282 ntBASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 AL132994.1-201ENST00000554098 400 ntBASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP43Q8NDM7 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 AC140479.7-201ENST00000636301 2332 ntBASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 LINC00265-2P-201ENST00000413372 782 ntBASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 KRT18P4-201ENST00000422599 1288 ntBASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC22.16■■□□□ 1.14
CFAP43Q8NDM7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 AC019109.1-201ENST00000401725 1874 ntBASIC22.15■■□□□ 1.14
CFAP43Q8NDM7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms