Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
TRIML2Q8N7C3 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIML2Q8N7C3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIML2Q8N7C3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIML2Q8N7C3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIML2Q8N7C3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIML2Q8N7C3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIML2Q8N7C3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 AL023775.1-201ENST00000454907 1746 ntBASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 AL512638.1-201ENST00000457493 794 ntBASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 AC009407.1-201ENST00000568958 598 ntBASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 AC055811.4-201ENST00000624039 1754 ntBASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIML2Q8N7C3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 MEX3B-202ENST00000558133 4333 ntBASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIML2Q8N7C3 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIML2Q8N7C3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TRIML2Q8N7C3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIML2Q8N7C3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIML2Q8N7C3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIML2Q8N7C3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIML2Q8N7C3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIML2Q8N7C3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIML2Q8N7C3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIML2Q8N7C3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIML2Q8N7C3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.27□□□□□ -0.13
TRIML2Q8N7C3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIML2Q8N7C3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.27□□□□□ -0.13
TRIML2Q8N7C3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIML2Q8N7C3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIML2Q8N7C3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms