Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 AC004945.1-201ENST00000416738 983 ntBASIC13.57□□□□□ -0.24
VRK2Q86Y07 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 FAM8A4P-201ENST00000435433 1213 ntBASIC13.57□□□□□ -0.24
VRK2Q86Y07 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 MIR4683-201ENST00000579659 81 ntBASIC13.57□□□□□ -0.24
VRK2Q86Y07 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 AC015936.2-201ENST00000593177 259 ntBASIC13.57□□□□□ -0.24
VRK2Q86Y07 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 TCAM1P-207ENST00000485295 1537 ntBASIC13.57□□□□□ -0.24
VRK2Q86Y07 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.57□□□□□ -0.24
VRK2Q86Y07 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
VRK2Q86Y07 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VRK2Q86Y07 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 TTTY23B-201ENST00000442790 549 ntBASIC13.56□□□□□ -0.24
VRK2Q86Y07 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 AC233724.13-201ENST00000598383 410 ntBASIC13.56□□□□□ -0.24
VRK2Q86Y07 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 AC002472.3-201ENST00000640124 621 ntBASIC13.56□□□□□ -0.24
VRK2Q86Y07 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 KRT8P24-201ENST00000560290 1559 ntBASIC13.56□□□□□ -0.24
VRK2Q86Y07 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms