Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 AC022137.2-201ENST00000503482 481 ntBASIC9.83□□□□□ -0.84
SCXQ7RTU7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 RNA5SP412-201ENST00000516234 123 ntBASIC9.83□□□□□ -0.84
SCXQ7RTU7 FAM8A2P-201ENST00000528813 1142 ntBASIC9.83□□□□□ -0.84
SCXQ7RTU7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 AC079316.1-201ENST00000548397 411 ntBASIC9.83□□□□□ -0.84
SCXQ7RTU7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 MIR4538-201ENST00000581377 78 ntBASIC9.83□□□□□ -0.84
SCXQ7RTU7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 AC244669.2-201ENST00000612320 853 ntBASIC9.83□□□□□ -0.84
SCXQ7RTU7 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 CSPG4P11-201ENST00000560634 4910 ntBASIC9.83□□□□□ -0.84
SCXQ7RTU7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 EML1-203ENST00000334192 4064 ntTSL 5 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC9.83□□□□□ -0.84
SCXQ7RTU7 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SCXQ7RTU7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SCXQ7RTU7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SCXQ7RTU7 AC013726.1-201ENST00000563747 2285 ntBASIC9.82□□□□□ -0.84
SCXQ7RTU7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC9.82□□□□□ -0.84
SCXQ7RTU7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC9.82□□□□□ -0.84
SCXQ7RTU7 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SCXQ7RTU7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC9.82□□□□□ -0.84
SCXQ7RTU7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SCXQ7RTU7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
SCXQ7RTU7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
SCXQ7RTU7 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SCXQ7RTU7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC9.82□□□□□ -0.84
SCXQ7RTU7 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC9.82□□□□□ -0.84
SCXQ7RTU7 ARHGAP23P1-201ENST00000562773 1937 ntBASIC9.82□□□□□ -0.84
SCXQ7RTU7 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC9.82□□□□□ -0.84
SCXQ7RTU7 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SCXQ7RTU7 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
SCXQ7RTU7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC9.82□□□□□ -0.84
SCXQ7RTU7 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SCXQ7RTU7 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SCXQ7RTU7 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SCXQ7RTU7 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
SCXQ7RTU7 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
SCXQ7RTU7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
SCXQ7RTU7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SCXQ7RTU7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SCXQ7RTU7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
SCXQ7RTU7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC9.82□□□□□ -0.84
SCXQ7RTU7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SCXQ7RTU7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC9.82□□□□□ -0.84
SCXQ7RTU7 KRT18P25-201ENST00000508931 1278 ntBASIC9.82□□□□□ -0.84
SCXQ7RTU7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
SCXQ7RTU7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SCXQ7RTU7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms