Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 UROS-201ENST00000368774 744 ntTSL 2 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 AL135901.1-201ENST00000451812 333 ntBASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 AC013726.1-201ENST00000563747 2285 ntBASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.78■□□□□ 0.28
OTOP1Q7RTM1 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 AC007292.2-201ENST00000593524 1812 ntBASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 GUSBP10-201ENST00000417412 665 ntBASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 BRI3P1-201ENST00000440440 378 ntBASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 ALG3P1-201ENST00000508806 1114 ntBASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 GCOM2-201ENST00000509133 1104 ntBASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 AP005212.2-201ENST00000584979 510 ntBASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 AC006548.2-201ENST00000605217 529 ntBASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 AL627230.2-201ENST00000613254 655 ntBASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 AC004554.1-201ENST00000422830 1468 ntBASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.77■□□□□ 0.28
OTOP1Q7RTM1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
OTOP1Q7RTM1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.77■□□□□ 0.27
OTOP1Q7RTM1 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.77■□□□□ 0.27
OTOP1Q7RTM1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
OTOP1Q7RTM1 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.77■□□□□ 0.27
OTOP1Q7RTM1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
OTOP1Q7RTM1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
OTOP1Q7RTM1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
OTOP1Q7RTM1 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
OTOP1Q7RTM1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.77■□□□□ 0.27
OTOP1Q7RTM1 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.77■□□□□ 0.27
OTOP1Q7RTM1 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
OTOP1Q7RTM1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
OTOP1Q7RTM1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
OTOP1Q7RTM1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.76■□□□□ 0.27
OTOP1Q7RTM1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
OTOP1Q7RTM1 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
OTOP1Q7RTM1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms