Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RIF1Q5UIP0 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 AL121949.1-201ENST00000402043 968 ntBASIC13.93□□□□□ -0.18
RIF1Q5UIP0 AL627095.1-201ENST00000414775 321 ntBASIC13.93□□□□□ -0.18
RIF1Q5UIP0 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 PRSS3P1-201ENST00000503996 742 ntBASIC13.93□□□□□ -0.18
RIF1Q5UIP0 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 AL133467.4-201ENST00000602953 725 ntBASIC13.93□□□□□ -0.18
RIF1Q5UIP0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 AL121753.2-201ENST00000624581 1461 ntBASIC13.93□□□□□ -0.18
RIF1Q5UIP0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 AC005722.1-201ENST00000431878 964 ntBASIC13.93□□□□□ -0.18
RIF1Q5UIP0 UGT1A12P-201ENST00000447084 853 ntBASIC13.93□□□□□ -0.18
RIF1Q5UIP0 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 NDUFB10P1-201ENST00000567319 521 ntBASIC13.93□□□□□ -0.18
RIF1Q5UIP0 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 AL365181.1-201ENST00000564032 1828 ntBASIC13.93□□□□□ -0.18
RIF1Q5UIP0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 AP000845.1-201ENST00000581677 2131 ntBASIC13.93□□□□□ -0.18
RIF1Q5UIP0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
RIF1Q5UIP0 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 AC092573.1-201ENST00000433054 884 ntBASIC13.92□□□□□ -0.18
RIF1Q5UIP0 RN7SL788P-201ENST00000460504 316 ntBASIC13.92□□□□□ -0.18
RIF1Q5UIP0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 WDR54-202ENST00000409791 854 ntTSL 3 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 FTH1P18-201ENST00000412071 549 ntBASIC13.92□□□□□ -0.18
RIF1Q5UIP0 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 AC005740.1-201ENST00000515639 522 ntBASIC13.92□□□□□ -0.18
RIF1Q5UIP0 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 AC090386.2-201ENST00000623010 1039 ntBASIC13.92□□□□□ -0.18
RIF1Q5UIP0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.92□□□□□ -0.18
RIF1Q5UIP0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RIF1Q5UIP0 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms