Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MTND2P15-201ENST00000418575 892 ntBASIC15.54■□□□□ 0.08
VARS2Q5ST30 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 CEP164P1-201ENST00000455142 418 ntBASIC15.54■□□□□ 0.08
VARS2Q5ST30 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 AC093534.1-201ENST00000504977 132 ntBASIC15.54■□□□□ 0.08
VARS2Q5ST30 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 AC006453.1-201ENST00000636037 1257 ntBASIC15.54■□□□□ 0.08
VARS2Q5ST30 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VARS2Q5ST30 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VARS2Q5ST30 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
VARS2Q5ST30 MTCO1P15-201ENST00000529569 1526 ntBASIC15.53■□□□□ 0.08
VARS2Q5ST30 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.53■□□□□ 0.08
VARS2Q5ST30 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.53■□□□□ 0.08
VARS2Q5ST30 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.53■□□□□ 0.08
VARS2Q5ST30 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
VARS2Q5ST30 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.53■□□□□ 0.08
VARS2Q5ST30 AL445523.1-201ENST00000451184 1362 ntBASIC15.53■□□□□ 0.08
VARS2Q5ST30 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.53■□□□□ 0.08
VARS2Q5ST30 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.53■□□□□ 0.08
VARS2Q5ST30 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
VARS2Q5ST30 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.53■□□□□ 0.08
VARS2Q5ST30 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.53■□□□□ 0.08
VARS2Q5ST30 AC114501.1-201ENST00000445949 172 ntBASIC15.53■□□□□ 0.08
VARS2Q5ST30 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC15.53■□□□□ 0.08
VARS2Q5ST30 RN7SL818P-201ENST00000485099 259 ntBASIC15.53■□□□□ 0.08
VARS2Q5ST30 IGLV3-15-201ENST00000518356 244 ntBASIC15.53■□□□□ 0.08
VARS2Q5ST30 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 AP000944.1-201ENST00000533886 564 ntTSL 4 BASIC15.53■□□□□ 0.08
VARS2Q5ST30 AC003686.1-201ENST00000550956 1034 ntBASIC15.53■□□□□ 0.08
VARS2Q5ST30 PRKXP1-201ENST00000561423 1122 ntBASIC15.53■□□□□ 0.08
VARS2Q5ST30 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.53■□□□□ 0.08
VARS2Q5ST30 RN7SL725P-201ENST00000606439 259 ntBASIC15.53■□□□□ 0.08
VARS2Q5ST30 MEG3_2.1-201ENST00000611456 105 ntBASIC15.53■□□□□ 0.08
VARS2Q5ST30 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
VARS2Q5ST30 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
VARS2Q5ST30 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 LINC02228-204ENST00000642115 2962 ntBASIC15.53■□□□□ 0.08
VARS2Q5ST30 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VARS2Q5ST30 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
VARS2Q5ST30 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VARS2Q5ST30 FLJ16779-201ENST00000612722 7638 ntBASIC15.52■□□□□ 0.08
VARS2Q5ST30 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.52■□□□□ 0.08
VARS2Q5ST30 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VARS2Q5ST30 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.52■□□□□ 0.08
VARS2Q5ST30 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VARS2Q5ST30 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
VARS2Q5ST30 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
VARS2Q5ST30 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
VARS2Q5ST30 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
VARS2Q5ST30 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.52■□□□□ 0.08
VARS2Q5ST30 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VARS2Q5ST30 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.52■□□□□ 0.08
VARS2Q5ST30 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
VARS2Q5ST30 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VARS2Q5ST30 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
VARS2Q5ST30 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VARS2Q5ST30 AHCYP4-201ENST00000419201 1315 ntBASIC15.52■□□□□ 0.08
VARS2Q5ST30 FRMPD2B-201ENST00000431305 1347 ntBASIC15.52■□□□□ 0.08
VARS2Q5ST30 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
VARS2Q5ST30 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.52■□□□□ 0.08
VARS2Q5ST30 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VARS2Q5ST30 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VARS2Q5ST30 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VARS2Q5ST30 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VARS2Q5ST30 OR2R1P-201ENST00000441404 914 ntBASIC15.52■□□□□ 0.08
VARS2Q5ST30 ART2BP-201ENST00000453501 499 ntBASIC15.52■□□□□ 0.08
VARS2Q5ST30 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC15.52■□□□□ 0.08
VARS2Q5ST30 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC15.52■□□□□ 0.08
VARS2Q5ST30 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms