Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 AP005117.1-202ENST00000581724 1908 ntBASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RSPO4Q2I0M5 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 AC127383.1-201ENST00000444697 1800 ntBASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RSPO4Q2I0M5 FKBP4P8-201ENST00000610931 1369 ntBASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 GGTLC4P-201ENST00000402176 664 ntBASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 KRT18P4-201ENST00000422599 1288 ntBASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 TLE1P1-201ENST00000422965 589 ntBASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.02□□□□□ -0.17
RSPO4Q2I0M5 AC007292.2-201ENST00000593524 1812 ntBASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 AL137077.2-201ENST00000635124 1608 ntBASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 AC008536.3-201ENST00000623282 1599 ntBASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 AL008638.4-201ENST00000624792 1315 ntBASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RSPO4Q2I0M5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms