Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
IRX4P78413 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.38■□□□□ 0.05
IRX4P78413 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.38■□□□□ 0.05
IRX4P78413 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
IRX4P78413 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
IRX4P78413 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
IRX4P78413 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.38■□□□□ 0.05
IRX4P78413 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.38■□□□□ 0.05
IRX4P78413 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.37■□□□□ 0.05
IRX4P78413 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
IRX4P78413 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
IRX4P78413 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.37■□□□□ 0.05
IRX4P78413 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.37■□□□□ 0.05
IRX4P78413 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.37■□□□□ 0.05
IRX4P78413 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.37■□□□□ 0.05
IRX4P78413 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
IRX4P78413 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.37■□□□□ 0.05
IRX4P78413 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.37■□□□□ 0.05
IRX4P78413 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.37■□□□□ 0.05
IRX4P78413 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.37■□□□□ 0.05
IRX4P78413 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.37■□□□□ 0.05
IRX4P78413 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.37■□□□□ 0.05
IRX4P78413 UPF3AP2-201ENST00000457924 1132 ntBASIC15.37■□□□□ 0.05
IRX4P78413 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.37■□□□□ 0.05
IRX4P78413 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.37■□□□□ 0.05
IRX4P78413 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.37■□□□□ 0.05
IRX4P78413 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
IRX4P78413 AC020914.3-201ENST00000594712 304 ntBASIC15.37■□□□□ 0.05
IRX4P78413 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.37■□□□□ 0.05
IRX4P78413 AP005019.2-201ENST00000615104 511 ntBASIC15.37■□□□□ 0.05
IRX4P78413 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.37■□□□□ 0.05
IRX4P78413 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
IRX4P78413 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.37■□□□□ 0.05
IRX4P78413 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.37■□□□□ 0.05
IRX4P78413 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.37■□□□□ 0.05
IRX4P78413 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IRX4P78413 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
IRX4P78413 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.36■□□□□ 0.05
IRX4P78413 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IRX4P78413 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IRX4P78413 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IRX4P78413 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IRX4P78413 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IRX4P78413 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.36■□□□□ 0.05
IRX4P78413 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
IRX4P78413 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
IRX4P78413 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.36■□□□□ 0.05
IRX4P78413 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IRX4P78413 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.36■□□□□ 0.05
IRX4P78413 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IRX4P78413 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IRX4P78413 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IRX4P78413 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.36■□□□□ 0.05
IRX4P78413 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IRX4P78413 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.36■□□□□ 0.05
IRX4P78413 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
IRX4P78413 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.36■□□□□ 0.05
IRX4P78413 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IRX4P78413 HIST2H2BC-201ENST00000498492 580 ntBASIC15.36■□□□□ 0.05
IRX4P78413 KRT18P25-201ENST00000508931 1278 ntBASIC15.36■□□□□ 0.05
IRX4P78413 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
IRX4P78413 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IRX4P78413 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.36■□□□□ 0.05
IRX4P78413 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.36■□□□□ 0.05
IRX4P78413 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.36■□□□□ 0.05
IRX4P78413 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.36■□□□□ 0.05
IRX4P78413 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.36■□□□□ 0.05
IRX4P78413 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.36■□□□□ 0.05
IRX4P78413 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IRX4P78413 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
IRX4P78413 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
IRX4P78413 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.36■□□□□ 0.05
IRX4P78413 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IRX4P78413 AC015818.8-201ENST00000587907 1519 ntBASIC15.36■□□□□ 0.05
IRX4P78413 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.36■□□□□ 0.05
IRX4P78413 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
IRX4P78413 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
IRX4P78413 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
IRX4P78413 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
IRX4P78413 AL137784.3-201ENST00000623858 2288 ntBASIC15.36■□□□□ 0.05
IRX4P78413 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms