Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.9□□□□□ -0.18
GABREP78334 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
GABREP78334 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.9□□□□□ -0.18
GABREP78334 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABREP78334 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
GABREP78334 AHCYP4-201ENST00000419201 1315 ntBASIC13.9□□□□□ -0.19
GABREP78334 AC138035.3-201ENST00000622706 2791 ntBASIC13.89□□□□□ -0.19
GABREP78334 AC006486.2-201ENST00000624246 2199 ntBASIC13.89□□□□□ -0.19
GABREP78334 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.89□□□□□ -0.19
GABREP78334 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.89□□□□□ -0.19
GABREP78334 AP002414.2-201ENST00000591780 3365 ntBASIC13.89□□□□□ -0.19
GABREP78334 AC090502.4-201ENST00000551714 1386 ntBASIC13.89□□□□□ -0.19
GABREP78334 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.89□□□□□ -0.19
GABREP78334 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.89□□□□□ -0.19
GABREP78334 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC13.89□□□□□ -0.19
GABREP78334 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC13.89□□□□□ -0.19
GABREP78334 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 AC004837.1-201ENST00000446267 564 ntBASIC13.89□□□□□ -0.19
GABREP78334 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.89□□□□□ -0.19
GABREP78334 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 ORAOV1P1-201ENST00000503108 395 ntBASIC13.89□□□□□ -0.19
GABREP78334 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
GABREP78334 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.89□□□□□ -0.19
GABREP78334 AC084781.1-201ENST00000613737 656 ntBASIC13.89□□□□□ -0.19
GABREP78334 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.89□□□□□ -0.19
GABREP78334 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
GABREP78334 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.89□□□□□ -0.19
GABREP78334 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.89□□□□□ -0.19
GABREP78334 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
GABREP78334 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.89□□□□□ -0.19
GABREP78334 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
GABREP78334 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
GABREP78334 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
GABREP78334 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABREP78334 MYO15B-237ENST00000642007 4893 ntBASIC13.89□□□□□ -0.19
GABREP78334 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABREP78334 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABREP78334 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABREP78334 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.88□□□□□ -0.19
GABREP78334 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABREP78334 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABREP78334 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABREP78334 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABREP78334 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABREP78334 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.88□□□□□ -0.19
GABREP78334 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GABREP78334 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.88□□□□□ -0.19
GABREP78334 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABREP78334 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
GABREP78334 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABREP78334 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
GABREP78334 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABREP78334 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABREP78334 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABREP78334 AC007292.2-201ENST00000593524 1812 ntBASIC13.88□□□□□ -0.19
GABREP78334 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.88□□□□□ -0.19
GABREP78334 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.88□□□□□ -0.19
GABREP78334 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
GABREP78334 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
GABREP78334 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.88□□□□□ -0.19
GABREP78334 AC234644.1-201ENST00000406065 370 ntBASIC13.88□□□□□ -0.19
GABREP78334 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.88□□□□□ -0.19
GABREP78334 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC13.88□□□□□ -0.19
GABREP78334 AC092638.2-201ENST00000441105 947 ntBASIC13.88□□□□□ -0.19
GABREP78334 LYPLA2P1-203ENST00000447689 696 ntBASIC13.88□□□□□ -0.19
GABREP78334 DUX4L50-201ENST00000455245 715 ntBASIC13.88□□□□□ -0.19
GABREP78334 PPOX-204ENST00000462866 473 ntTSL 5 BASIC13.88□□□□□ -0.19
GABREP78334 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
GABREP78334 REEP5-205ENST00000504247 480 ntTSL 5 BASIC13.88□□□□□ -0.19
GABREP78334 MRPL22P1-201ENST00000505398 616 ntBASIC13.88□□□□□ -0.19
GABREP78334 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GABREP78334 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.88□□□□□ -0.19
GABREP78334 TMCO5B-205ENST00000530020 894 ntBASIC13.88□□□□□ -0.19
GABREP78334 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.88□□□□□ -0.19
GABREP78334 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GABREP78334 RN7SL470P-201ENST00000583069 259 ntBASIC13.88□□□□□ -0.19
GABREP78334 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
GABREP78334 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms