Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN17P56750 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLDN17P56750 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN17P56750 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN17P56750 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN17P56750 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN17P56750 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN17P56750 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN17P56750 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN17P56750 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN17P56750 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN17P56750 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN17P56750 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN17P56750 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN17P56750 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN17P56750 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN17P56750 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN17P56750 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CLDN17P56750 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
CLDN17P56750 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN17P56750 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CLDN17P56750 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN17P56750 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN17P56750 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN17P56750 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CLDN17P56750 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN17P56750 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN17P56750 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN17P56750 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN17P56750 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN17P56750 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN17P56750 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.11□□□□□ -0.31
CLDN17P56750 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN17P56750 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN17P56750 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN17P56750 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.11□□□□□ -0.31
CLDN17P56750 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN17P56750 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CLDN17P56750 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.11□□□□□ -0.31
CLDN17P56750 MIR4741-201ENST00000579822 90 ntBASIC13.11□□□□□ -0.31
CLDN17P56750 MIR4259-201ENST00000584466 101 ntBASIC13.11□□□□□ -0.31
CLDN17P56750 AC008825.2-201ENST00000603374 718 ntBASIC13.11□□□□□ -0.31
CLDN17P56750 AC027601.3-201ENST00000622907 509 ntBASIC13.11□□□□□ -0.31
CLDN17P56750 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN17P56750 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN17P56750 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN17P56750 KHSRPP1-201ENST00000427983 1768 ntBASIC13.11□□□□□ -0.31
CLDN17P56750 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CLDN17P56750 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CLDN17P56750 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
CLDN17P56750 LINC01230-201ENST00000625222 3017 ntBASIC13.11□□□□□ -0.31
CLDN17P56750 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN17P56750 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN17P56750 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN17P56750 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN17P56750 AL590440.2-201ENST00000641973 1595 ntBASIC13.11□□□□□ -0.31
CLDN17P56750 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN17P56750 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.11□□□□□ -0.31
CLDN17P56750 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN17P56750 SHC1P1-201ENST00000425230 1745 ntBASIC13.1□□□□□ -0.31
CLDN17P56750 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN17P56750 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN17P56750 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN17P56750 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN17P56750 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN17P56750 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN17P56750 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN17P56750 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN17P56750 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN17P56750 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN17P56750 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CLDN17P56750 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.1□□□□□ -0.31
CLDN17P56750 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN17P56750 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN17P56750 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN17P56750 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CLDN17P56750 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
CLDN17P56750 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN17P56750 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN17P56750 GK-202ENST00000378941 458 ntTSL 3 BASIC13.1□□□□□ -0.31
CLDN17P56750 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CLDN17P56750 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CLDN17P56750 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.1□□□□□ -0.31
CLDN17P56750 FAM21FP-201ENST00000426241 1131 ntBASIC13.1□□□□□ -0.31
CLDN17P56750 CICP12-201ENST00000455801 843 ntBASIC13.1□□□□□ -0.31
CLDN17P56750 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN17P56750 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CLDN17P56750 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.1□□□□□ -0.31
CLDN17P56750 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CLDN17P56750 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN17P56750 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN17P56750 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CLDN17P56750 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN17P56750 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN17P56750 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.1□□□□□ -0.31
CLDN17P56750 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.1□□□□□ -0.31
CLDN17P56750 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
CLDN17P56750 AC215219.1-201ENST00000400706 1817 ntBASIC13.1□□□□□ -0.31
CLDN17P56750 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN17P56750 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms