Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 OR8S1-201ENST00000310194 1080 ntBASIC14□□□□□ -0.17
NR1H2P55055 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 NME2P1-201ENST00000426182 414 ntBASIC14□□□□□ -0.17
NR1H2P55055 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14□□□□□ -0.17
NR1H2P55055 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14□□□□□ -0.17
NR1H2P55055 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 AC010336.2-201ENST00000564226 506 ntBASIC14□□□□□ -0.17
NR1H2P55055 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NR1H2P55055 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14□□□□□ -0.17
NR1H2P55055 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14□□□□□ -0.17
NR1H2P55055 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14□□□□□ -0.17
NR1H2P55055 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NR1H2P55055 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14□□□□□ -0.17
NR1H2P55055 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14□□□□□ -0.17
NR1H2P55055 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14□□□□□ -0.17
NR1H2P55055 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
NR1H2P55055 AP002761.4-201ENST00000565433 3361 ntBASIC14□□□□□ -0.17
NR1H2P55055 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NR1H2P55055 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H2P55055 IMPDH1P4-201ENST00000445028 1534 ntBASIC14□□□□□ -0.17
NR1H2P55055 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14□□□□□ -0.17
NR1H2P55055 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NR1H2P55055 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
NR1H2P55055 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.99□□□□□ -0.17
NR1H2P55055 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.99□□□□□ -0.17
NR1H2P55055 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NR1H2P55055 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NR1H2P55055 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NR1H2P55055 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H2P55055 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.99□□□□□ -0.17
NR1H2P55055 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
NR1H2P55055 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H2P55055 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.99□□□□□ -0.17
NR1H2P55055 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.99□□□□□ -0.17
NR1H2P55055 DOC2GP-202ENST00000514950 1163 ntBASIC13.99□□□□□ -0.17
NR1H2P55055 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.99□□□□□ -0.17
NR1H2P55055 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.99□□□□□ -0.17
NR1H2P55055 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.99□□□□□ -0.17
NR1H2P55055 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.99□□□□□ -0.17
NR1H2P55055 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.99□□□□□ -0.17
NR1H2P55055 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H2P55055 AC004840.1-201ENST00000636359 365 ntBASIC13.99□□□□□ -0.17
NR1H2P55055 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H2P55055 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.99□□□□□ -0.17
NR1H2P55055 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H2P55055 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NR1H2P55055 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H2P55055 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H2P55055 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H2P55055 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.98□□□□□ -0.17
NR1H2P55055 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NR1H2P55055 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.98□□□□□ -0.17
NR1H2P55055 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NR1H2P55055 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.98□□□□□ -0.17
NR1H2P55055 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
NR1H2P55055 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms