Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
HCFC1P51610 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HCFC1P51610 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.66□□□□□ -0.38
HCFC1P51610 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.66□□□□□ -0.38
HCFC1P51610 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.66□□□□□ -0.38
HCFC1P51610 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HCFC1P51610 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HCFC1P51610 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.66□□□□□ -0.38
HCFC1P51610 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.66□□□□□ -0.38
HCFC1P51610 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 LINC01101-201ENST00000622953 1884 ntBASIC12.66□□□□□ -0.38
HCFC1P51610 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
HCFC1P51610 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 PSMD4P1-201ENST00000433951 1109 ntBASIC12.66□□□□□ -0.38
HCFC1P51610 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC12.66□□□□□ -0.38
HCFC1P51610 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.66□□□□□ -0.38
HCFC1P51610 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.66□□□□□ -0.38
HCFC1P51610 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.66□□□□□ -0.38
HCFC1P51610 ALG1L6P-201ENST00000515248 758 ntBASIC12.66□□□□□ -0.38
HCFC1P51610 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
HCFC1P51610 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.66□□□□□ -0.38
HCFC1P51610 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC12.66□□□□□ -0.38
HCFC1P51610 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.66□□□□□ -0.38
HCFC1P51610 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.66□□□□□ -0.38
HCFC1P51610 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.66□□□□□ -0.38
HCFC1P51610 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HCFC1P51610 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HCFC1P51610 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.65□□□□□ -0.38
HCFC1P51610 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.65□□□□□ -0.38
HCFC1P51610 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
HCFC1P51610 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.65□□□□□ -0.38
HCFC1P51610 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
HCFC1P51610 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.65□□□□□ -0.38
HCFC1P51610 AJ011931.1-201ENST00000618749 2492 ntBASIC12.65□□□□□ -0.38
HCFC1P51610 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.65□□□□□ -0.38
HCFC1P51610 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
HCFC1P51610 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.65□□□□□ -0.38
HCFC1P51610 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.65□□□□□ -0.38
HCFC1P51610 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
HCFC1P51610 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
HCFC1P51610 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.65□□□□□ -0.38
HCFC1P51610 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.65□□□□□ -0.38
HCFC1P51610 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.65□□□□□ -0.38
HCFC1P51610 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
HCFC1P51610 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.65□□□□□ -0.38
HCFC1P51610 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.65□□□□□ -0.38
HCFC1P51610 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 AC099063.4-201ENST00000641099 1602 ntBASIC12.65□□□□□ -0.38
HCFC1P51610 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC12.65□□□□□ -0.38
HCFC1P51610 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HCFC1P51610 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
HCFC1P51610 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
HCFC1P51610 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
HCFC1P51610 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.65□□□□□ -0.39
HCFC1P51610 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
HCFC1P51610 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.64□□□□□ -0.39
HCFC1P51610 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.64□□□□□ -0.39
HCFC1P51610 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.64□□□□□ -0.39
HCFC1P51610 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
HCFC1P51610 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HCFC1P51610 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.64□□□□□ -0.39
HCFC1P51610 LINC00634-202ENST00000505157 222 ntBASIC12.64□□□□□ -0.39
HCFC1P51610 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
HCFC1P51610 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms