Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC6A12P48065 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC6A12P48065 OR2I1P-209ENST00000641730 5365 ntBASIC14.08□□□□□ -0.15
SLC6A12P48065 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC6A12P48065 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC6A12P48065 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC6A12P48065 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC6A12P48065 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLC6A12P48065 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SLC6A12P48065 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC6A12P48065 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC6A12P48065 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC6A12P48065 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLC6A12P48065 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.08□□□□□ -0.16
SLC6A12P48065 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC6A12P48065 ST13P19-201ENST00000442505 1124 ntBASIC14.08□□□□□ -0.16
SLC6A12P48065 YBX1P6-201ENST00000442962 1002 ntBASIC14.08□□□□□ -0.16
SLC6A12P48065 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.08□□□□□ -0.16
SLC6A12P48065 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC6A12P48065 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.08□□□□□ -0.16
SLC6A12P48065 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.08□□□□□ -0.16
SLC6A12P48065 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.08□□□□□ -0.16
SLC6A12P48065 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC6A12P48065 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC6A12P48065 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC6A12P48065 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
SLC6A12P48065 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC6A12P48065 RBM8B-201ENST00000555532 525 ntBASIC14.08□□□□□ -0.16
SLC6A12P48065 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SLC6A12P48065 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC6A12P48065 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SLC6A12P48065 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC6A12P48065 COX11-210ENST00000639671 696 ntBASIC14.08□□□□□ -0.16
SLC6A12P48065 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
SLC6A12P48065 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC6A12P48065 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC6A12P48065 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SLC6A12P48065 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLC6A12P48065 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
SLC6A12P48065 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SLC6A12P48065 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC6A12P48065 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC6A12P48065 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC6A12P48065 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC6A12P48065 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC6A12P48065 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC6A12P48065 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC6A12P48065 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC6A12P48065 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC6A12P48065 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SLC6A12P48065 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.07□□□□□ -0.16
SLC6A12P48065 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SLC6A12P48065 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SLC6A12P48065 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC6A12P48065 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SLC6A12P48065 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SLC6A12P48065 FAM58BP-201ENST00000439056 645 ntBASIC14.07□□□□□ -0.16
SLC6A12P48065 KRT223P-202ENST00000449164 1292 ntBASIC14.07□□□□□ -0.16
SLC6A12P48065 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.07□□□□□ -0.16
SLC6A12P48065 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC6A12P48065 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC6A12P48065 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC6A12P48065 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SLC6A12P48065 MIR4259-201ENST00000584466 101 ntBASIC14.07□□□□□ -0.16
SLC6A12P48065 AC133552.6-201ENST00000613406 534 ntBASIC14.07□□□□□ -0.16
SLC6A12P48065 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.07□□□□□ -0.16
SLC6A12P48065 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.07□□□□□ -0.16
SLC6A12P48065 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
SLC6A12P48065 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SLC6A12P48065 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC6A12P48065 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC6A12P48065 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SLC6A12P48065 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC6A12P48065 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC6A12P48065 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC6A12P48065 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SLC6A12P48065 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC6A12P48065 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC6A12P48065 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC6A12P48065 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC6A12P48065 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC6A12P48065 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms