Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRPHP41219 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRPHP41219 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
PRPHP41219 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.52■□□□□ 0.24
PRPHP41219 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PRPHP41219 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRPHP41219 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.52■□□□□ 0.24
PRPHP41219 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.52■□□□□ 0.24
PRPHP41219 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.52■□□□□ 0.24
PRPHP41219 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.52■□□□□ 0.24
PRPHP41219 IGHV3-71-201ENST00000523324 359 ntBASIC16.52■□□□□ 0.24
PRPHP41219 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.52■□□□□ 0.24
PRPHP41219 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.52■□□□□ 0.24
PRPHP41219 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PRPHP41219 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRPHP41219 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PRPHP41219 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRPHP41219 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.52■□□□□ 0.24
PRPHP41219 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRPHP41219 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRPHP41219 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PRPHP41219 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRPHP41219 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRPHP41219 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
PRPHP41219 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRPHP41219 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRPHP41219 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRPHP41219 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
PRPHP41219 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
PRPHP41219 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.51■□□□□ 0.23
PRPHP41219 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PRPHP41219 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 AC015818.8-201ENST00000587907 1519 ntBASIC16.51■□□□□ 0.23
PRPHP41219 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.51■□□□□ 0.23
PRPHP41219 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PRPHP41219 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 OR8S1-201ENST00000310194 1080 ntBASIC16.51■□□□□ 0.23
PRPHP41219 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PRPHP41219 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.51■□□□□ 0.23
PRPHP41219 MIR658-201ENST00000385210 100 ntBASIC16.51■□□□□ 0.23
PRPHP41219 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.51■□□□□ 0.23
PRPHP41219 FAM21FP-201ENST00000426241 1131 ntBASIC16.51■□□□□ 0.23
PRPHP41219 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.51■□□□□ 0.23
PRPHP41219 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.51■□□□□ 0.23
PRPHP41219 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.51■□□□□ 0.23
PRPHP41219 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 MIR4741-201ENST00000579822 90 ntBASIC16.51■□□□□ 0.23
PRPHP41219 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.51■□□□□ 0.23
PRPHP41219 AL162426.1-201ENST00000624141 743 ntBASIC16.51■□□□□ 0.23
PRPHP41219 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PRPHP41219 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.51■□□□□ 0.23
PRPHP41219 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PRPHP41219 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.51■□□□□ 0.23
PRPHP41219 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRPHP41219 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PRPHP41219 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
PRPHP41219 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 HSPA8P5-201ENST00000456928 2069 ntBASIC16.5■□□□□ 0.23
PRPHP41219 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.5■□□□□ 0.23
PRPHP41219 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PRPHP41219 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.5■□□□□ 0.23
PRPHP41219 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PRPHP41219 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PRPHP41219 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.5■□□□□ 0.23
PRPHP41219 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.5■□□□□ 0.23
PRPHP41219 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.5■□□□□ 0.23
PRPHP41219 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.5■□□□□ 0.23
PRPHP41219 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.5■□□□□ 0.23
PRPHP41219 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms