Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-FP30511 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-FP30511 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-FP30511 LINC02228-204ENST00000642115 2962 ntBASIC14.78□□□□□ -0.04
HLA-FP30511 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-FP30511 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HLA-FP30511 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-FP30511 AC026320.2-201ENST00000434379 478 ntBASIC14.78□□□□□ -0.04
HLA-FP30511 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HLA-FP30511 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-FP30511 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.78□□□□□ -0.04
HLA-FP30511 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 AC008723.1-201ENST00000506922 207 ntBASIC14.78□□□□□ -0.04
HLA-FP30511 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
HLA-FP30511 PHBP15-201ENST00000574228 665 ntBASIC14.78□□□□□ -0.04
HLA-FP30511 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HLA-FP30511 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 AL022334.2-201ENST00000610000 484 ntBASIC14.78□□□□□ -0.04
HLA-FP30511 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-FP30511 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 AC007718.1-201ENST00000621078 280 ntBASIC14.78□□□□□ -0.04
HLA-FP30511 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
HLA-FP30511 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-FP30511 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-FP30511 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-FP30511 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-FP30511 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-FP30511 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.77□□□□□ -0.04
HLA-FP30511 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-FP30511 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-FP30511 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-FP30511 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.77□□□□□ -0.04
HLA-FP30511 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-FP30511 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-FP30511 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-FP30511 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-FP30511 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-FP30511 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-FP30511 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-FP30511 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-FP30511 FAM90A2P-201ENST00000511144 1395 ntBASIC14.77□□□□□ -0.04
HLA-FP30511 FAM90A25P-201ENST00000528404 1395 ntBASIC14.77□□□□□ -0.04
HLA-FP30511 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-FP30511 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-FP30511 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-FP30511 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.77□□□□□ -0.05
HLA-FP30511 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-FP30511 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-FP30511 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.77□□□□□ -0.05
HLA-FP30511 AL161932.2-201ENST00000435436 679 ntBASIC14.77□□□□□ -0.05
HLA-FP30511 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.77□□□□□ -0.05
HLA-FP30511 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.77□□□□□ -0.05
HLA-FP30511 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-FP30511 RN7SL67P-201ENST00000492147 296 ntBASIC14.77□□□□□ -0.05
HLA-FP30511 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-FP30511 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-FP30511 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.77□□□□□ -0.05
HLA-FP30511 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.77□□□□□ -0.05
HLA-FP30511 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.77□□□□□ -0.05
HLA-FP30511 LINC01783-202ENST00000614408 828 ntBASIC14.77□□□□□ -0.05
HLA-FP30511 BX284668.2-205ENST00000619677 828 ntBASIC14.77□□□□□ -0.05
HLA-FP30511 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.77□□□□□ -0.05
HLA-FP30511 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-FP30511 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-FP30511 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-FP30511 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
HLA-FP30511 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-FP30511 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-FP30511 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-FP30511 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-FP30511 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-FP30511 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
HLA-FP30511 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-FP30511 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-FP30511 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HLA-FP30511 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-FP30511 AC113367.3-201ENST00000508316 1912 ntBASIC14.76□□□□□ -0.05
HLA-FP30511 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
HLA-FP30511 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-FP30511 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-FP30511 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-FP30511 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-FP30511 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-FP30511 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-FP30511 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms