Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.61□□□□□ -0.39
CD40P25942 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
CD40P25942 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.61□□□□□ -0.39
CD40P25942 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.61□□□□□ -0.39
CD40P25942 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.61□□□□□ -0.39
CD40P25942 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 AHCYP4-201ENST00000419201 1315 ntBASIC12.61□□□□□ -0.39
CD40P25942 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD40P25942 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.61□□□□□ -0.39
CD40P25942 CICP14-201ENST00000629111 2732 ntBASIC12.61□□□□□ -0.39
CD40P25942 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CD40P25942 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 AC239868.1-201ENST00000369385 493 ntBASIC12.6□□□□□ -0.39
CD40P25942 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CD40P25942 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.6□□□□□ -0.39
CD40P25942 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.6□□□□□ -0.39
CD40P25942 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.6□□□□□ -0.39
CD40P25942 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.6□□□□□ -0.39
CD40P25942 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.6□□□□□ -0.39
CD40P25942 AC027237.1-201ENST00000560942 655 ntBASIC12.6□□□□□ -0.39
CD40P25942 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 AC092299.1-201ENST00000632679 757 ntBASIC12.6□□□□□ -0.39
CD40P25942 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CD40P25942 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.6□□□□□ -0.39
CD40P25942 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.6□□□□□ -0.39
CD40P25942 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.6□□□□□ -0.39
CD40P25942 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.6□□□□□ -0.39
CD40P25942 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD40P25942 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CD40P25942 AL354702.1-201ENST00000442006 1960 ntBASIC12.6□□□□□ -0.39
CD40P25942 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CD40P25942 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.59□□□□□ -0.39
CD40P25942 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.59□□□□□ -0.39
CD40P25942 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.59□□□□□ -0.39
CD40P25942 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CD40P25942 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.59□□□□□ -0.39
CD40P25942 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.59□□□□□ -0.39
CD40P25942 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CD40P25942 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.59□□□□□ -0.39
CD40P25942 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.59□□□□□ -0.39
CD40P25942 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.59□□□□□ -0.39
CD40P25942 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CD40P25942 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CD40P25942 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 KRT18P36-201ENST00000411618 1276 ntBASIC12.59□□□□□ -0.39
CD40P25942 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.59□□□□□ -0.39
CD40P25942 AL353637.1-201ENST00000451571 732 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms