Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LMO1P25800 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO1P25800 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LMO1P25800 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.31□□□□□ -0.44
LMO1P25800 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
LMO1P25800 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.31□□□□□ -0.44
LMO1P25800 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.31□□□□□ -0.44
LMO1P25800 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
LMO1P25800 AC009093.10-201ENST00000641956 1442 ntBASIC12.31□□□□□ -0.44
LMO1P25800 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
LMO1P25800 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.31□□□□□ -0.44
LMO1P25800 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.31□□□□□ -0.44
LMO1P25800 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LMO1P25800 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.31□□□□□ -0.44
LMO1P25800 TMEM14DP-201ENST00000422205 345 ntBASIC12.31□□□□□ -0.44
LMO1P25800 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
LMO1P25800 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.31□□□□□ -0.44
LMO1P25800 KRT43P-201ENST00000434019 910 ntBASIC12.31□□□□□ -0.44
LMO1P25800 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.31□□□□□ -0.44
LMO1P25800 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.31□□□□□ -0.44
LMO1P25800 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.31□□□□□ -0.44
LMO1P25800 AL590640.2-201ENST00000457038 527 ntBASIC12.31□□□□□ -0.44
LMO1P25800 COX5BP1-201ENST00000507622 393 ntBASIC12.31□□□□□ -0.44
LMO1P25800 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
LMO1P25800 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.31□□□□□ -0.44
LMO1P25800 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.31□□□□□ -0.44
LMO1P25800 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 ZACNP1-201ENST00000612259 710 ntBASIC12.31□□□□□ -0.44
LMO1P25800 AC244669.2-201ENST00000612320 853 ntBASIC12.31□□□□□ -0.44
LMO1P25800 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.31□□□□□ -0.44
LMO1P25800 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
LMO1P25800 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LMO1P25800 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.31□□□□□ -0.44
LMO1P25800 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.31□□□□□ -0.44
LMO1P25800 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
LMO1P25800 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
LMO1P25800 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LMO1P25800 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.3□□□□□ -0.44
LMO1P25800 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO1P25800 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO1P25800 KRT8P24-201ENST00000560290 1559 ntBASIC12.3□□□□□ -0.44
LMO1P25800 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
LMO1P25800 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
LMO1P25800 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO1P25800 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LMO1P25800 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO1P25800 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO1P25800 AC011498.7-201ENST00000624986 2027 ntBASIC12.3□□□□□ -0.44
LMO1P25800 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LMO1P25800 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO1P25800 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO1P25800 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LMO1P25800 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO1P25800 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO1P25800 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.3□□□□□ -0.44
LMO1P25800 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.3□□□□□ -0.44
LMO1P25800 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO1P25800 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
LMO1P25800 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms