Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CDH3P22223 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH3P22223 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CDH3P22223 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
CDH3P22223 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CDH3P22223 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH3P22223 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH3P22223 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH3P22223 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH3P22223 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CDH3P22223 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
CDH3P22223 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CDH3P22223 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDH3P22223 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH3P22223 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 MIR326-201ENST00000362220 95 ntBASIC14.47□□□□□ -0.09
CDH3P22223 BTBD6P1-201ENST00000412176 1267 ntBASIC14.47□□□□□ -0.09
CDH3P22223 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDH3P22223 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 MESTP3-201ENST00000503460 968 ntBASIC14.47□□□□□ -0.09
CDH3P22223 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH3P22223 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH3P22223 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.47□□□□□ -0.09
CDH3P22223 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH3P22223 PPY2P-201ENST00000582808 702 ntBASIC14.47□□□□□ -0.09
CDH3P22223 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 EEF1DP1-201ENST00000585891 896 ntBASIC14.47□□□□□ -0.09
CDH3P22223 AC091271.1-201ENST00000611877 1162 ntBASIC14.47□□□□□ -0.09
CDH3P22223 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.47□□□□□ -0.09
CDH3P22223 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH3P22223 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH3P22223 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CDH3P22223 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CDH3P22223 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH3P22223 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDH3P22223 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH3P22223 AC005562.1-201ENST00000583030 3219 ntBASIC14.47□□□□□ -0.09
CDH3P22223 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDH3P22223 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH3P22223 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH3P22223 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH3P22223 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH3P22223 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH3P22223 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH3P22223 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH3P22223 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH3P22223 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CDH3P22223 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH3P22223 KRT8P4-201ENST00000509735 1454 ntBASIC14.46□□□□□ -0.09
CDH3P22223 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH3P22223 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH3P22223 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CDH3P22223 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH3P22223 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH3P22223 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH3P22223 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH3P22223 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDH3P22223 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.46□□□□□ -0.09
CDH3P22223 MTX1P1-201ENST00000440904 838 ntBASIC14.46□□□□□ -0.09
CDH3P22223 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH3P22223 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.46□□□□□ -0.09
CDH3P22223 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH3P22223 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH3P22223 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CDH3P22223 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH3P22223 C2orf69P2-201ENST00000562032 1123 ntBASIC14.46□□□□□ -0.09
CDH3P22223 MIR4538-201ENST00000581377 78 ntBASIC14.46□□□□□ -0.09
CDH3P22223 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH3P22223 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CDH3P22223 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH3P22223 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH3P22223 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH3P22223 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms