Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.69■□□□□ 0.74
ATF3P18847 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.69■□□□□ 0.74
ATF3P18847 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF3P18847 AC011270.2-201ENST00000624293 2550 ntBASIC19.69■□□□□ 0.74
ATF3P18847 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATF3P18847 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF3P18847 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC19.69■□□□□ 0.74
ATF3P18847 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ATF3P18847 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ATF3P18847 STK24P1-201ENST00000455035 1291 ntBASIC19.69■□□□□ 0.74
ATF3P18847 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
ATF3P18847 MIR2278-201ENST00000516344 96 ntBASIC19.69■□□□□ 0.74
ATF3P18847 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATF3P18847 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC19.69■□□□□ 0.74
ATF3P18847 AC078814.4-201ENST00000546650 327 ntBASIC19.69■□□□□ 0.74
ATF3P18847 AC004801.1-201ENST00000549557 360 ntBASIC19.69■□□□□ 0.74
ATF3P18847 AC005586.2-201ENST00000563946 837 ntBASIC19.69■□□□□ 0.74
ATF3P18847 RN7SL602P-201ENST00000578326 324 ntBASIC19.69■□□□□ 0.74
ATF3P18847 RN7SL718P-201ENST00000581254 303 ntBASIC19.69■□□□□ 0.74
ATF3P18847 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC19.69■□□□□ 0.74
ATF3P18847 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.69■□□□□ 0.74
ATF3P18847 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATF3P18847 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC19.69■□□□□ 0.74
ATF3P18847 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF3P18847 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF3P18847 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATF3P18847 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATF3P18847 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.69■□□□□ 0.74
ATF3P18847 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF3P18847 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC19.69■□□□□ 0.74
ATF3P18847 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATF3P18847 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF3P18847 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ATF3P18847 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATF3P18847 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF3P18847 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
ATF3P18847 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.68■□□□□ 0.74
ATF3P18847 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF3P18847 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF3P18847 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATF3P18847 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF3P18847 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF3P18847 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC19.68■□□□□ 0.74
ATF3P18847 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATF3P18847 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC19.68■□□□□ 0.74
ATF3P18847 BAK1P2-201ENST00000532665 631 ntBASIC19.68■□□□□ 0.74
ATF3P18847 SRP14-208ENST00000560773 468 ntTSL 3 BASIC19.68■□□□□ 0.74
ATF3P18847 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC19.68■□□□□ 0.74
ATF3P18847 AL136982.5-201ENST00000605222 294 ntBASIC19.68■□□□□ 0.74
ATF3P18847 URAHP-205ENST00000610227 398 ntBASIC19.68■□□□□ 0.74
ATF3P18847 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC19.68■□□□□ 0.74
ATF3P18847 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF3P18847 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF3P18847 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF3P18847 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF3P18847 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATF3P18847 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATF3P18847 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
ATF3P18847 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF3P18847 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF3P18847 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF3P18847 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF3P18847 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATF3P18847 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF3P18847 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF3P18847 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.67■□□□□ 0.74
ATF3P18847 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF3P18847 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF3P18847 AC022080.1-201ENST00000366255 781 ntBASIC19.67■□□□□ 0.74
ATF3P18847 SNORA57-201ENST00000383870 149 ntBASIC19.67■□□□□ 0.74
ATF3P18847 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ATF3P18847 AL157823.1-201ENST00000403727 628 ntBASIC19.67■□□□□ 0.74
ATF3P18847 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC19.67■□□□□ 0.74
ATF3P18847 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC19.67■□□□□ 0.74
ATF3P18847 AC093300.1-201ENST00000510368 1201 ntBASIC19.67■□□□□ 0.74
ATF3P18847 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC19.67■□□□□ 0.74
ATF3P18847 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATF3P18847 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC19.67■□□□□ 0.74
ATF3P18847 RN7SL556P-201ENST00000582856 298 ntBASIC19.67■□□□□ 0.74
ATF3P18847 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC19.67■□□□□ 0.74
ATF3P18847 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC19.67■□□□□ 0.74
ATF3P18847 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATF3P18847 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.67■□□□□ 0.74
ATF3P18847 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.67■□□□□ 0.74
ATF3P18847 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF3P18847 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF3P18847 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC19.67■□□□□ 0.74
ATF3P18847 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC19.67■□□□□ 0.74
ATF3P18847 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.67■□□□□ 0.74
ATF3P18847 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF3P18847 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATF3P18847 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF3P18847 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATF3P18847 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.66■□□□□ 0.74
ATF3P18847 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATF3P18847 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATF3P18847 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC19.66■□□□□ 0.74
ATF3P18847 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATF3P18847 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ATF3P18847 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms