Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 AL050341.2-201ENST00000567508 1541 ntBASIC11.8□□□□□ -0.52
ACANP16112 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.8□□□□□ -0.52
ACANP16112 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ACANP16112 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ACANP16112 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.8□□□□□ -0.52
ACANP16112 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC11.8□□□□□ -0.52
ACANP16112 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC11.8□□□□□ -0.52
ACANP16112 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 AL121949.3-201ENST00000406684 385 ntBASIC11.8□□□□□ -0.52
ACANP16112 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 RN7SL578P-201ENST00000477781 283 ntBASIC11.8□□□□□ -0.52
ACANP16112 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC11.8□□□□□ -0.52
ACANP16112 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC11.8□□□□□ -0.52
ACANP16112 GPX3-202ENST00000517973 612 ntTSL 3 BASIC11.8□□□□□ -0.52
ACANP16112 LY6E-215ENST00000523847 427 ntTSL 3 BASIC11.8□□□□□ -0.52
ACANP16112 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC11.8□□□□□ -0.52
ACANP16112 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC11.8□□□□□ -0.52
ACANP16112 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC11.8□□□□□ -0.52
ACANP16112 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC11.8□□□□□ -0.52
ACANP16112 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
ACANP16112 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ACANP16112 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC11.8□□□□□ -0.52
ACANP16112 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.8□□□□□ -0.52
ACANP16112 AC006986.1-201ENST00000612764 241 ntBASIC11.8□□□□□ -0.52
ACANP16112 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
ACANP16112 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
ACANP16112 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC11.8□□□□□ -0.52
ACANP16112 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.8□□□□□ -0.52
ACANP16112 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ACANP16112 AC139712.1-201ENST00000378256 1875 ntBASIC11.79□□□□□ -0.52
ACANP16112 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.79□□□□□ -0.52
ACANP16112 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC11.79□□□□□ -0.52
ACANP16112 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
ACANP16112 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
ACANP16112 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
ACANP16112 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC11.79□□□□□ -0.52
ACANP16112 IFNWP2-201ENST00000431203 580 ntBASIC11.79□□□□□ -0.52
ACANP16112 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC11.79□□□□□ -0.52
ACANP16112 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 KRT8P2-201ENST00000556193 944 ntBASIC11.79□□□□□ -0.52
ACANP16112 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ACANP16112 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ACANP16112 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
ACANP16112 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
ACANP16112 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.79□□□□□ -0.52
ACANP16112 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
ACANP16112 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.79□□□□□ -0.52
ACANP16112 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.79□□□□□ -0.52
ACANP16112 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 AP000244.1-201ENST00000424582 201 ntBASIC11.79□□□□□ -0.52
ACANP16112 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 AC011431.1-201ENST00000512971 230 ntBASIC11.79□□□□□ -0.52
ACANP16112 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC11.79□□□□□ -0.52
ACANP16112 AP003040.1-201ENST00000532044 1024 ntBASIC11.79□□□□□ -0.52
ACANP16112 NAA40-205ENST00000539656 577 ntTSL 4 BASIC11.79□□□□□ -0.52
ACANP16112 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC11.79□□□□□ -0.52
ACANP16112 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC11.79□□□□□ -0.52
ACANP16112 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC11.79□□□□□ -0.52
ACANP16112 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
ACANP16112 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ACANP16112 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms