Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.78■□□□□ 0.28
BMP3P12645 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.78■□□□□ 0.28
BMP3P12645 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 KRT18P9-201ENST00000604826 1300 ntBASIC16.78■□□□□ 0.28
BMP3P12645 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.78■□□□□ 0.28
BMP3P12645 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.78■□□□□ 0.28
BMP3P12645 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.78■□□□□ 0.28
BMP3P12645 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.78■□□□□ 0.28
BMP3P12645 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.78■□□□□ 0.28
BMP3P12645 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.78■□□□□ 0.28
BMP3P12645 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.78■□□□□ 0.28
BMP3P12645 AC092580.1-201ENST00000433998 658 ntBASIC16.78■□□□□ 0.28
BMP3P12645 AL161932.2-201ENST00000435436 679 ntBASIC16.78■□□□□ 0.28
BMP3P12645 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.78■□□□□ 0.28
BMP3P12645 RPSAP15-201ENST00000448168 861 ntBASIC16.78■□□□□ 0.28
BMP3P12645 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.78■□□□□ 0.28
BMP3P12645 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.78■□□□□ 0.28
BMP3P12645 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.78■□□□□ 0.28
BMP3P12645 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.78■□□□□ 0.28
BMP3P12645 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.78■□□□□ 0.28
BMP3P12645 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.78■□□□□ 0.28
BMP3P12645 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
BMP3P12645 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
BMP3P12645 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
BMP3P12645 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.78■□□□□ 0.28
BMP3P12645 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BMP3P12645 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BMP3P12645 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.77■□□□□ 0.28
BMP3P12645 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BMP3P12645 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BMP3P12645 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BMP3P12645 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
BMP3P12645 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BMP3P12645 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.77■□□□□ 0.28
BMP3P12645 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
BMP3P12645 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.77■□□□□ 0.28
BMP3P12645 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
BMP3P12645 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.77■□□□□ 0.28
BMP3P12645 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.77■□□□□ 0.28
BMP3P12645 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.77■□□□□ 0.28
BMP3P12645 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.77■□□□□ 0.28
BMP3P12645 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BMP3P12645 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BMP3P12645 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.77■□□□□ 0.28
BMP3P12645 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.77■□□□□ 0.28
BMP3P12645 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BMP3P12645 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.77■□□□□ 0.28
BMP3P12645 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.77■□□□□ 0.28
BMP3P12645 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.77■□□□□ 0.28
BMP3P12645 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.77■□□□□ 0.28
BMP3P12645 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.77■□□□□ 0.28
BMP3P12645 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.77■□□□□ 0.28
BMP3P12645 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.77■□□□□ 0.28
BMP3P12645 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
BMP3P12645 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
BMP3P12645 MIR6074-201ENST00000612054 107 ntBASIC16.77■□□□□ 0.28
BMP3P12645 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.77■□□□□ 0.28
BMP3P12645 LAP3P2-201ENST00000454686 1454 ntBASIC16.77■□□□□ 0.28
BMP3P12645 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BMP3P12645 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BMP3P12645 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BMP3P12645 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BMP3P12645 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BMP3P12645 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BMP3P12645 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.77■□□□□ 0.27
BMP3P12645 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BMP3P12645 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BMP3P12645 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
BMP3P12645 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BMP3P12645 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BMP3P12645 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
BMP3P12645 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.77■□□□□ 0.27
BMP3P12645 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BMP3P12645 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
BMP3P12645 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
BMP3P12645 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
BMP3P12645 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BMP3P12645 AC063926.3-201ENST00000624734 5658 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms