Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.07■□□□□ 0.16
CD4P01730 FO393412.1-201ENST00000619841 382 ntBASIC16.07■□□□□ 0.16
CD4P01730 AC138466.5-201ENST00000624002 808 ntBASIC16.07■□□□□ 0.16
CD4P01730 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.07■□□□□ 0.16
CD4P01730 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.07■□□□□ 0.16
CD4P01730 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD4P01730 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.07■□□□□ 0.16
CD4P01730 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CD4P01730 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.07■□□□□ 0.16
CD4P01730 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD4P01730 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.07■□□□□ 0.16
CD4P01730 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.06■□□□□ 0.16
CD4P01730 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.06■□□□□ 0.16
CD4P01730 TCAF2P1-201ENST00000291129 2421 ntBASIC16.06■□□□□ 0.16
CD4P01730 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CD4P01730 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CD4P01730 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.06■□□□□ 0.16
CD4P01730 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 KRT17P5-201ENST00000332088 839 ntBASIC16.06■□□□□ 0.16
CD4P01730 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.06■□□□□ 0.16
CD4P01730 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.06■□□□□ 0.16
CD4P01730 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.06■□□□□ 0.16
CD4P01730 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.06■□□□□ 0.16
CD4P01730 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.06■□□□□ 0.16
CD4P01730 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.06■□□□□ 0.16
CD4P01730 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC16.06■□□□□ 0.16
CD4P01730 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.06■□□□□ 0.16
CD4P01730 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.06■□□□□ 0.16
CD4P01730 ALG1L13P-202ENST00000519320 584 ntBASIC16.06■□□□□ 0.16
CD4P01730 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.06■□□□□ 0.16
CD4P01730 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.06■□□□□ 0.16
CD4P01730 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.06■□□□□ 0.16
CD4P01730 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CD4P01730 LINC00431-202ENST00000636375 159 ntBASIC16.06■□□□□ 0.16
CD4P01730 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.06■□□□□ 0.16
CD4P01730 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
CD4P01730 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.06■□□□□ 0.16
CD4P01730 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CD4P01730 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD4P01730 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.05■□□□□ 0.16
CD4P01730 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.05■□□□□ 0.16
CD4P01730 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.05■□□□□ 0.16
CD4P01730 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.05■□□□□ 0.16
CD4P01730 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 AC009093.10-201ENST00000641956 1442 ntBASIC16.05■□□□□ 0.16
CD4P01730 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CD4P01730 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.05■□□□□ 0.16
CD4P01730 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 MRPL37P1-201ENST00000592451 1337 ntBASIC16.05■□□□□ 0.16
CD4P01730 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CD4P01730 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 AC026410.1-201ENST00000507366 1101 ntBASIC16.05■□□□□ 0.16
CD4P01730 AC138466.4-201ENST00000623965 852 ntBASIC16.05■□□□□ 0.16
CD4P01730 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.05■□□□□ 0.16
CD4P01730 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.05■□□□□ 0.16
CD4P01730 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.05■□□□□ 0.16
CD4P01730 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CD4P01730 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.05■□□□□ 0.16
CD4P01730 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CD4P01730 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.05■□□□□ 0.16
CD4P01730 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CD4P01730 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD4P01730 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CD4P01730 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms