Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC13.09□□□□□ -0.31
ALX3O95076 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ALX3O95076 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
ALX3O95076 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ALX3O95076 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
ALX3O95076 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ALX3O95076 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ALX3O95076 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
ALX3O95076 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
ALX3O95076 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ALX3O95076 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ALX3O95076 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.08□□□□□ -0.32
ALX3O95076 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ALX3O95076 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ALX3O95076 NUS1P3-201ENST00000423502 862 ntBASIC13.08□□□□□ -0.32
ALX3O95076 AC092580.3-201ENST00000430932 139 ntBASIC13.08□□□□□ -0.32
ALX3O95076 AL353779.1-201ENST00000434793 351 ntBASIC13.08□□□□□ -0.32
ALX3O95076 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.08□□□□□ -0.32
ALX3O95076 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.08□□□□□ -0.32
ALX3O95076 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.08□□□□□ -0.32
ALX3O95076 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.08□□□□□ -0.32
ALX3O95076 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.08□□□□□ -0.32
ALX3O95076 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.08□□□□□ -0.32
ALX3O95076 AKR1B10P2-201ENST00000577332 927 ntBASIC13.08□□□□□ -0.32
ALX3O95076 AL158212.4-201ENST00000624062 1286 ntBASIC13.08□□□□□ -0.32
ALX3O95076 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.08□□□□□ -0.32
ALX3O95076 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.08□□□□□ -0.32
ALX3O95076 AC099521.2-201ENST00000619354 2036 ntBASIC13.08□□□□□ -0.32
ALX3O95076 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ALX3O95076 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
ALX3O95076 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.08□□□□□ -0.32
ALX3O95076 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALX3O95076 AP002761.4-201ENST00000565433 3361 ntBASIC13.07□□□□□ -0.32
ALX3O95076 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.07□□□□□ -0.32
ALX3O95076 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALX3O95076 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ALX3O95076 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ALX3O95076 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALX3O95076 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ALX3O95076 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALX3O95076 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALX3O95076 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ALX3O95076 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALX3O95076 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.07□□□□□ -0.32
ALX3O95076 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.07□□□□□ -0.32
ALX3O95076 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ALX3O95076 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.07□□□□□ -0.32
ALX3O95076 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.07□□□□□ -0.32
ALX3O95076 AC100757.3-201ENST00000622361 1406 ntBASIC13.07□□□□□ -0.32
ALX3O95076 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.07□□□□□ -0.32
ALX3O95076 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALX3O95076 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALX3O95076 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.07□□□□□ -0.32
ALX3O95076 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALX3O95076 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALX3O95076 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ALX3O95076 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ALX3O95076 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ALX3O95076 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALX3O95076 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALX3O95076 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALX3O95076 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.07□□□□□ -0.32
ALX3O95076 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.07□□□□□ -0.32
ALX3O95076 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.07□□□□□ -0.32
ALX3O95076 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.07□□□□□ -0.32
ALX3O95076 AC009477.1-201ENST00000452936 217 ntBASIC13.07□□□□□ -0.32
ALX3O95076 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.07□□□□□ -0.32
ALX3O95076 AC097493.3-201ENST00000509725 367 ntBASIC13.07□□□□□ -0.32
ALX3O95076 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC13.07□□□□□ -0.32
ALX3O95076 MTND2P7-201ENST00000521337 640 ntBASIC13.07□□□□□ -0.32
ALX3O95076 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.07□□□□□ -0.32
ALX3O95076 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.07□□□□□ -0.32
ALX3O95076 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.07□□□□□ -0.32
ALX3O95076 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms