Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RN7SL574P-201ENST00000581512 297 ntBASIC14.73□□□□□ -0.05
SMAD6O43541 AC097724.1-201ENST00000609581 426 ntBASIC14.73□□□□□ -0.05
SMAD6O43541 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.73□□□□□ -0.05
SMAD6O43541 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD6O43541 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD6O43541 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD6O43541 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD6O43541 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.73□□□□□ -0.05
SMAD6O43541 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.73□□□□□ -0.05
SMAD6O43541 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD6O43541 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD6O43541 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD6O43541 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.73□□□□□ -0.05
SMAD6O43541 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
SMAD6O43541 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD6O43541 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMAD6O43541 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMAD6O43541 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SMAD6O43541 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMAD6O43541 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.72□□□□□ -0.05
SMAD6O43541 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SMAD6O43541 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.72□□□□□ -0.05
SMAD6O43541 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.72□□□□□ -0.05
SMAD6O43541 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.72□□□□□ -0.05
SMAD6O43541 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.72□□□□□ -0.05
SMAD6O43541 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
SMAD6O43541 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SMAD6O43541 AL662890.1-201ENST00000396818 632 ntBASIC14.72□□□□□ -0.05
SMAD6O43541 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.72□□□□□ -0.05
SMAD6O43541 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.72□□□□□ -0.05
SMAD6O43541 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.72□□□□□ -0.05
SMAD6O43541 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.72□□□□□ -0.05
SMAD6O43541 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.72□□□□□ -0.05
SMAD6O43541 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SMAD6O43541 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.72□□□□□ -0.05
SMAD6O43541 AC005586.2-201ENST00000563946 837 ntBASIC14.72□□□□□ -0.05
SMAD6O43541 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
SMAD6O43541 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.72□□□□□ -0.05
SMAD6O43541 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SMAD6O43541 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.72□□□□□ -0.05
SMAD6O43541 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.72□□□□□ -0.05
SMAD6O43541 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.72□□□□□ -0.05
SMAD6O43541 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMAD6O43541 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
SMAD6O43541 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMAD6O43541 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SMAD6O43541 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMAD6O43541 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SMAD6O43541 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SMAD6O43541 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMAD6O43541 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
SMAD6O43541 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMAD6O43541 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.71□□□□□ -0.05
SMAD6O43541 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SMAD6O43541 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SMAD6O43541 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SMAD6O43541 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SMAD6O43541 AHCYP4-201ENST00000419201 1315 ntBASIC14.71□□□□□ -0.05
SMAD6O43541 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
SMAD6O43541 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.71□□□□□ -0.05
SMAD6O43541 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMAD6O43541 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SMAD6O43541 RN7SL832P-201ENST00000607781 1756 ntBASIC14.71□□□□□ -0.05
SMAD6O43541 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.71□□□□□ -0.05
SMAD6O43541 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SMAD6O43541 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SMAD6O43541 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.71□□□□□ -0.05
SMAD6O43541 AL161932.2-201ENST00000435436 679 ntBASIC14.71□□□□□ -0.05
SMAD6O43541 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.71□□□□□ -0.05
SMAD6O43541 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.71□□□□□ -0.05
SMAD6O43541 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.71□□□□□ -0.05
SMAD6O43541 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.71□□□□□ -0.05
SMAD6O43541 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.71□□□□□ -0.05
SMAD6O43541 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.71□□□□□ -0.05
SMAD6O43541 NUP210P1-202ENST00000504322 710 ntBASIC14.71□□□□□ -0.05
SMAD6O43541 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.71□□□□□ -0.05
SMAD6O43541 AC090857.1-201ENST00000527400 390 ntBASIC14.71□□□□□ -0.05
SMAD6O43541 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.71□□□□□ -0.05
SMAD6O43541 AF254983.2-201ENST00000612331 135 ntBASIC14.71□□□□□ -0.05
SMAD6O43541 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.71□□□□□ -0.05
SMAD6O43541 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMAD6O43541 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SMAD6O43541 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SMAD6O43541 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.71□□□□□ -0.05
SMAD6O43541 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.71□□□□□ -0.05
SMAD6O43541 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.71□□□□□ -0.05
SMAD6O43541 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.71□□□□□ -0.05
SMAD6O43541 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMAD6O43541 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMAD6O43541 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMAD6O43541 AC012617.1-204ENST00000586340 2305 ntBASIC14.71□□□□□ -0.05
SMAD6O43541 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.71□□□□□ -0.06
SMAD6O43541 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SMAD6O43541 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
SMAD6O43541 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SMAD6O43541 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMAD6O43541 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMAD6O43541 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMAD6O43541 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMAD6O43541 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms