Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 AC144831.1-201ENST00000573312 2656 ntBASIC16.7■□□□□ 0.26
ATP2A1O14983 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A1O14983 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP2A1O14983 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ATP2A1O14983 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ATP2A1O14983 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP2A1O14983 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A1O14983 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ATP2A1O14983 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 AL592076.1-201ENST00000424448 303 ntBASIC16.7■□□□□ 0.26
ATP2A1O14983 RPL8P2-201ENST00000430538 502 ntBASIC16.7■□□□□ 0.26
ATP2A1O14983 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP2A1O14983 AP000358.1-201ENST00000456260 156 ntBASIC16.7■□□□□ 0.26
ATP2A1O14983 AC114947.1-202ENST00000514136 344 ntBASIC16.7■□□□□ 0.26
ATP2A1O14983 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP2A1O14983 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
ATP2A1O14983 IQSEC3P1-201ENST00000538799 536 ntBASIC16.7■□□□□ 0.26
ATP2A1O14983 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP2A1O14983 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP2A1O14983 RN7SL555P-201ENST00000584742 339 ntBASIC16.7■□□□□ 0.26
ATP2A1O14983 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A1O14983 SIGLEC18P-201ENST00000602271 909 ntBASIC16.7■□□□□ 0.26
ATP2A1O14983 AL022334.2-201ENST00000610000 484 ntBASIC16.7■□□□□ 0.26
ATP2A1O14983 COX6A1P2-201ENST00000620597 330 ntBASIC16.7■□□□□ 0.26
ATP2A1O14983 AL805961.1-201ENST00000642026 753 ntBASIC16.7■□□□□ 0.26
ATP2A1O14983 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ATP2A1O14983 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
ATP2A1O14983 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A1O14983 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ATP2A1O14983 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ATP2A1O14983 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 KRT18P9-201ENST00000604826 1300 ntBASIC16.7■□□□□ 0.26
ATP2A1O14983 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A1O14983 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 SBF1P1-201ENST00000444527 5631 ntBASIC16.69■□□□□ 0.26
ATP2A1O14983 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2A1O14983 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ATP2A1O14983 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ATP2A1O14983 AL513477.1-201ENST00000602865 2407 ntBASIC16.69■□□□□ 0.26
ATP2A1O14983 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
ATP2A1O14983 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2A1O14983 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
ATP2A1O14983 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2A1O14983 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.69■□□□□ 0.26
ATP2A1O14983 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ATP2A1O14983 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2A1O14983 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.69■□□□□ 0.26
ATP2A1O14983 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.69■□□□□ 0.26
ATP2A1O14983 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.69■□□□□ 0.26
ATP2A1O14983 RN7SL181P-201ENST00000462921 277 ntBASIC16.69■□□□□ 0.26
ATP2A1O14983 NDUFS6P1-201ENST00000485187 316 ntBASIC16.69■□□□□ 0.26
ATP2A1O14983 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2A1O14983 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.69■□□□□ 0.26
ATP2A1O14983 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ATP2A1O14983 YRDCP1-201ENST00000621419 643 ntBASIC16.69■□□□□ 0.26
ATP2A1O14983 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ATP2A1O14983 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ATP2A1O14983 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2A1O14983 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP2A1O14983 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP2A1O14983 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP2A1O14983 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms