Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.14□□□□□ -0.15
SLC28A1O00337 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.14□□□□□ -0.15
SLC28A1O00337 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC28A1O00337 AC132938.4-201ENST00000623835 848 ntBASIC14.14□□□□□ -0.15
SLC28A1O00337 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC28A1O00337 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC28A1O00337 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SLC28A1O00337 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC28A1O00337 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC28A1O00337 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SLC28A1O00337 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC28A1O00337 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC28A1O00337 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SLC28A1O00337 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
SLC28A1O00337 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
SLC28A1O00337 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC28A1O00337 ARSEP1-201ENST00000420443 635 ntBASIC14.13□□□□□ -0.15
SLC28A1O00337 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.13□□□□□ -0.15
SLC28A1O00337 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC28A1O00337 BCRP1-201ENST00000444246 691 ntBASIC14.13□□□□□ -0.15
SLC28A1O00337 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC28A1O00337 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC28A1O00337 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC28A1O00337 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SLC28A1O00337 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC28A1O00337 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.13□□□□□ -0.15
SLC28A1O00337 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC28A1O00337 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC28A1O00337 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.13□□□□□ -0.15
SLC28A1O00337 MIR5189-201ENST00000577370 114 ntBASIC14.13□□□□□ -0.15
SLC28A1O00337 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC28A1O00337 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC28A1O00337 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC28A1O00337 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC28A1O00337 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC28A1O00337 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SLC28A1O00337 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC28A1O00337 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC28A1O00337 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 TUBB8P4-201ENST00000511806 1324 ntBASIC14.13□□□□□ -0.15
SLC28A1O00337 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SLC28A1O00337 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC28A1O00337 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC28A1O00337 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
SLC28A1O00337 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC28A1O00337 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
SLC28A1O00337 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC28A1O00337 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms