Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CDC7O00311 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC7O00311 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.4□□□□□ -0.1
CDC7O00311 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CDC7O00311 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC7O00311 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC7O00311 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.4□□□□□ -0.1
CDC7O00311 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CDC7O00311 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC7O00311 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CDC7O00311 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC7O00311 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
CDC7O00311 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC7O00311 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
CDC7O00311 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC7O00311 BEND3P1-201ENST00000421591 1944 ntBASIC14.39□□□□□ -0.11
CDC7O00311 KRT8P4-201ENST00000509735 1454 ntBASIC14.39□□□□□ -0.11
CDC7O00311 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC7O00311 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDC7O00311 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDC7O00311 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC7O00311 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC7O00311 AC006001.1-201ENST00000325130 474 ntBASIC14.39□□□□□ -0.11
CDC7O00311 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CDC7O00311 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC7O00311 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.39□□□□□ -0.11
CDC7O00311 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC7O00311 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CDC7O00311 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.39□□□□□ -0.11
CDC7O00311 CICP12-201ENST00000455801 843 ntBASIC14.39□□□□□ -0.11
CDC7O00311 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC7O00311 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.39□□□□□ -0.11
CDC7O00311 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.39□□□□□ -0.11
CDC7O00311 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC7O00311 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.39□□□□□ -0.11
CDC7O00311 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.39□□□□□ -0.11
CDC7O00311 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC7O00311 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.39□□□□□ -0.11
CDC7O00311 AL358472.3-201ENST00000608147 415 ntBASIC14.39□□□□□ -0.11
CDC7O00311 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC7O00311 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDC7O00311 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDC7O00311 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDC7O00311 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CDC7O00311 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.39□□□□□ -0.11
CDC7O00311 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDC7O00311 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CDC7O00311 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC7O00311 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC7O00311 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC7O00311 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDC7O00311 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
CDC7O00311 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC7O00311 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC7O00311 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CDC7O00311 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC7O00311 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC7O00311 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 TCAM1P-207ENST00000485295 1537 ntBASIC14.38□□□□□ -0.11
CDC7O00311 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC7O00311 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms