Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 GUCY2EP-203ENST00000531117 1918 ntBASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 ROBO4-208ENST00000533054 3071 ntTSL 2 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 INTS6L-206ENST00000639893 3904 ntTSL 5 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 PAFAH2-202ENST00000374284 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 AC138894.3-201ENST00000603787 634 ntBASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 MARK2P9-201ENST00000430958 1727 ntBASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 STRCP1-201ENST00000509801 5328 ntBASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 DIAPH2-203ENST00000373049 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 SLC4A9-201ENST00000432095 3086 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 AC009474.1-201ENST00000455096 1565 ntBASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 RCAN1-214ENST00000620920 2257 ntTSL 4 BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms