Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 HLA-DMA-203ENST00000395305 777 ntBASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 AL354861.1-201ENST00000445213 355 ntBASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 LYPLA2P1-203ENST00000447689 696 ntBASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 TMCO5B-205ENST00000530020 894 ntBASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 KRT8P1-201ENST00000557533 1207 ntBASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 AC105137.3-201ENST00000617588 984 ntBASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 MT3-203ENST00000565838 421 ntTSL 3 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 AP000322.3-201ENST00000608665 388 ntBASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 CMC2-224ENST00000630396 481 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 AC073347.1-201ENST00000421633 2643 ntBASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 AC090502.4-201ENST00000551714 1386 ntBASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC187A0A096LP49 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC187A0A096LP49 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms