Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 LST1-206ENST00000376090 689 ntTSL 2 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 LST1-209ENST00000376096 565 ntTSL 2 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 LST1-210ENST00000376099 610 ntTSL 2 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 LST1-214ENST00000418507 726 ntTSL 2 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 SLC25A47P1-201ENST00000531577 414 ntBASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 AL022328.1-201ENST00000610050 478 ntBASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 MIR6805-201ENST00000615055 62 ntBASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 AC023090.2-201ENST00000625182 2110 ntBASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TIMMDC1Q9NPL8 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 AC114271.1-201ENST00000612689 2813 ntBASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 WASH3P-207ENST00000560956 1394 ntBASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 AL118506.1-201ENST00000601296 3082 ntBASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 SSR1P1-201ENST00000407630 814 ntBASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 AC012497.1-201ENST00000429392 575 ntBASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 AL355864.2-201ENST00000447420 863 ntBASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TIMMDC1Q9NPL8 AC107373.2-201ENST00000607735 490 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms