Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 LINC01783-202ENST00000614408 828 ntBASIC17.1■□□□□ 0.33
EFCC1Q9HA90 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 BX284668.2-205ENST00000619677 828 ntBASIC17.1■□□□□ 0.33
EFCC1Q9HA90 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 AL138725.1-201ENST00000407347 1314 ntBASIC17.1■□□□□ 0.33
EFCC1Q9HA90 FRMPD2B-201ENST00000431305 1347 ntBASIC17.1■□□□□ 0.33
EFCC1Q9HA90 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
EFCC1Q9HA90 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 AL627422.1-201ENST00000434104 580 ntBASIC17.09■□□□□ 0.33
EFCC1Q9HA90 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 AC005962.1-201ENST00000584100 773 ntBASIC17.09■□□□□ 0.33
EFCC1Q9HA90 AC009884.2-201ENST00000603110 324 ntBASIC17.09■□□□□ 0.33
EFCC1Q9HA90 AP003392.6-201ENST00000607709 325 ntBASIC17.09■□□□□ 0.33
EFCC1Q9HA90 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 AC136759.1-202ENST00000530858 2194 ntBASIC17.09■□□□□ 0.33
EFCC1Q9HA90 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCC1Q9HA90 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 AC090616.6-203ENST00000579186 1945 ntBASIC17.08■□□□□ 0.33
EFCC1Q9HA90 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCC1Q9HA90 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
EFCC1Q9HA90 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.08■□□□□ 0.32
EFCC1Q9HA90 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
EFCC1Q9HA90 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
EFCC1Q9HA90 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.08■□□□□ 0.32
EFCC1Q9HA90 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EFCC1Q9HA90 AL583805.1-201ENST00000391389 531 ntBASIC17.08■□□□□ 0.32
EFCC1Q9HA90 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.08■□□□□ 0.32
EFCC1Q9HA90 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.08■□□□□ 0.32
EFCC1Q9HA90 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC17.08■□□□□ 0.32
EFCC1Q9HA90 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.08■□□□□ 0.32
EFCC1Q9HA90 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.08■□□□□ 0.32
EFCC1Q9HA90 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC17.08■□□□□ 0.32
EFCC1Q9HA90 AP000358.1-201ENST00000456260 156 ntBASIC17.08■□□□□ 0.32
EFCC1Q9HA90 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.08■□□□□ 0.32
EFCC1Q9HA90 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
EFCC1Q9HA90 DNM1P51-201ENST00000558149 522 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms