Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 AC092978.1-202ENST00000637590 1327 ntBASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 AC007686.3-201ENST00000619017 3487 ntBASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 AP000356.3-201ENST00000382243 753 ntBASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 AL512430.1-201ENST00000392575 860 ntBASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 DUTP3-201ENST00000450025 415 ntBASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 RN7SL181P-201ENST00000462921 277 ntBASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 IQSEC3P1-201ENST00000538799 536 ntBASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 AC093752.3-201ENST00000567343 901 ntBASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 AC092171.5-201ENST00000608012 942 ntBASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 MIR6842-201ENST00000612539 65 ntBASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PAAF1Q9BRP4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 AC011498.7-201ENST00000624986 2027 ntBASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 KRT17P5-201ENST00000332088 839 ntBASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 AL807761.2-201ENST00000422849 729 ntBASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 AL161932.2-201ENST00000435436 679 ntBASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 AC078991.1-201ENST00000437297 610 ntBASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 AC007326.1-201ENST00000604539 458 ntBASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 AC087045.2-201ENST00000606279 1003 ntBASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 INTS4P1-203ENST00000641008 3683 ntBASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PAAF1Q9BRP4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms